Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92516 | Canola | cytosol | 100.0 | 100.0 |
| CDY58967 | Canola | cytosol | 99.64 | 99.64 |
| AT5G19610.1 | Thale cress | cytosol | 92.72 | 92.58 |
| VIT_11s0016g04100.t01 | Wine grape | cytosol | 66.86 | 66.04 |
| PGSC0003DMT400019795 | Potato | cytosol | 64.97 | 64.59 |
| KRH39264 | Soybean | cytosol | 61.33 | 61.33 |
| GSMUA_Achr1P23070_001 | Banana | cytosol, nucleus, peroxisome | 43.19 | 58.25 |
| Solyc03g070470.1.1 | Tomato | nucleus | 64.46 | 57.77 |
| KRH48417 | Soybean | cytosol | 39.62 | 56.14 |
| TraesCS3B01G274600.1 | Wheat | cytosol | 55.28 | 54.68 |
| TraesCS3D01G246200.1 | Wheat | cytosol | 55.13 | 54.5 |
| TraesCS3A01G245300.1 | Wheat | cytosol | 54.92 | 54.4 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 54.84 | 54.33 |
| Os04t0117300-01 | Rice | cytosol, plasma membrane | 26.37 | 53.47 |
| EES17039 | Sorghum | cytosol | 53.97 | 52.48 |
| Zm00001d041752_P001 | Maize | cytosol | 53.46 | 52.06 |
| Bra019694.1-P | Field mustard | cytosol | 42.97 | 40.75 |
| Bra040986.1-P | Field mustard | cytosol | 37.8 | 36.22 |
| Bra028434.1-P | Field mustard | cytosol, plasma membrane, plastid | 37.87 | 31.04 |
| Bra032659.1-P | Field mustard | cytosol, plastid | 20.83 | 16.32 |
| Bra011611.1-P | Field mustard | plastid | 19.37 | 15.67 |
| Bra014466.1-P | Field mustard | cytosol | 20.1 | 15.6 |
| Bra033555.1-P | Field mustard | plastid | 18.86 | 15.34 |
| Bra019446.1-P | Field mustard | cytosol | 17.63 | 13.85 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | EnsemblPlantsGene:Bra002249 | EnsemblPlants:Bra002249.1 |
| EnsemblPlants:Bra002249.1-P | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009846 | GO:GO:0009856 | GO:GO:0009987 | GO:GO:0032012 | GO:GO:0065009 | GO:GO:0090406 |
| InterPro:IPR000904 | InterPro:IPR023394 | UniProt:M4CDG8 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 |
| PANTHER:PTHR44190 | PANTHER:PTHR44190:SF2 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf |
| InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI0002544FB5 | SEG:seg | : |
Description
AT5G19610 (E=0.0) | sec7 domain-containing protein
Coordinates
chrA10:+:10672747..10677116
Molecular Weight (calculated)
155650.0 Da
IEP (calculated)
4.789
GRAVY (calculated)
-0.100
Length
1373 amino acids
Sequence
(BLAST)
(BLAST)
0001: MERAVVKAKR KELGISCMLN TEVGAVLAVI RRPISESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQEWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKSPGAKD AMNSIVSGIT SCRLEKTDSI SEDAVMMRIL QVLTGVMKHP ASELLEDQAV CTIVNTCFQV VQQSAGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGEDG GEDSESDTDE IDMNSGYGIR CCIDIFHFLC SLLNVVEVVE NSEGTSVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMISSCI LNIYHFLRKF VRLQLEAFFS FVLLKVTAFT GFLQLQEVAL EGLINFCRQP AFIVEAYVNY DCDPICRNVF
0401: EETGKVLCRH TFPTSGPLTS MQIQAFEGLV ILIHNIADNM DREEDEGGEE EDSNAIKPSP VEINEYIPFW IEKPKEDFET WVEHIRVRKA QKRKLAIAAN
0501: HFNRDEKKGL EYLKYNHLVS DPPDPMALAS FFRFTPGLDK TMIGDYLGDP DELHLSVLKS FTHTFEFTGM NLDTALRTFL ESFRLPGESQ KIERMIEAFS
0601: ERFYNQQSSE IFASKDTVHI LCYSLIMLNT DQHNPQVKKK MTEDEFIRNN RAINAGKDLP REYLSELFQS ISTNAFALST HSGPVEMNPN RWIELMNRTR
0701: TTQPLSMCQF DRRIGRDMFA TIAGPSIAAV SAFFEHSDDD EVLHECVDAL ISIARVAQYG LEDILDELIA SFCKFTTLLN PYTTPEETLF AFSHDMKPRM
0801: ATLAVFTLAN SFGDSIRGGW RNIVDCLLKL RKLQLLPQSA IEFETTEEEA LSESDLNMLA SQENKFNRRQ GSSLMGRFSH FLALDSVEES VALGMSEFEQ
0901: NLKVIKQCRI GQIFSKSSVL PDVAVLNLGR SLIYAAAGKG QKFSTAIEEE ETVKFCWDLI IAVALSNIHR FNMFWPSYHE YLLNVANFPL FSPIPFVEKG
1001: IPGLFKVCIK ILAANLQDQL PEELIFRSIT IMWKIDKEII DTCYDTITEF VSRIITDHSA SLQTQIGWKS VLQLLSLCGR HPETKEQAVD ALIGLMSTNA
1101: SHLSQSSYAY CIDCSFSFVA LRNSAVEKNL TILDLMTESV TMLIQWYKTA STETVNNFSV ASNTSSSSSV EENSLRGVNF VHHLFLKLSE AFRKTTLARR
1201: EEIRNRAVTS LERSFTMAHE DLGFTPSGCI YCIDHVIFPT IDDLHEKLLD YSRRESAERE MRSMEGTLKI AMKMLKNVFL HYLEQIVGSA EFRTFWLGVL
1301: RRMDTCMKAD LGEYGDNKLQ EVVPELLTIM IGTMKEKEIL VQKEDDDLWE ITYIQIQWIA PSLKDELFPD EDM
0101: SILKILKIEI FDEKSPGAKD AMNSIVSGIT SCRLEKTDSI SEDAVMMRIL QVLTGVMKHP ASELLEDQAV CTIVNTCFQV VQQSAGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGEDG GEDSESDTDE IDMNSGYGIR CCIDIFHFLC SLLNVVEVVE NSEGTSVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMISSCI LNIYHFLRKF VRLQLEAFFS FVLLKVTAFT GFLQLQEVAL EGLINFCRQP AFIVEAYVNY DCDPICRNVF
0401: EETGKVLCRH TFPTSGPLTS MQIQAFEGLV ILIHNIADNM DREEDEGGEE EDSNAIKPSP VEINEYIPFW IEKPKEDFET WVEHIRVRKA QKRKLAIAAN
0501: HFNRDEKKGL EYLKYNHLVS DPPDPMALAS FFRFTPGLDK TMIGDYLGDP DELHLSVLKS FTHTFEFTGM NLDTALRTFL ESFRLPGESQ KIERMIEAFS
0601: ERFYNQQSSE IFASKDTVHI LCYSLIMLNT DQHNPQVKKK MTEDEFIRNN RAINAGKDLP REYLSELFQS ISTNAFALST HSGPVEMNPN RWIELMNRTR
0701: TTQPLSMCQF DRRIGRDMFA TIAGPSIAAV SAFFEHSDDD EVLHECVDAL ISIARVAQYG LEDILDELIA SFCKFTTLLN PYTTPEETLF AFSHDMKPRM
0801: ATLAVFTLAN SFGDSIRGGW RNIVDCLLKL RKLQLLPQSA IEFETTEEEA LSESDLNMLA SQENKFNRRQ GSSLMGRFSH FLALDSVEES VALGMSEFEQ
0901: NLKVIKQCRI GQIFSKSSVL PDVAVLNLGR SLIYAAAGKG QKFSTAIEEE ETVKFCWDLI IAVALSNIHR FNMFWPSYHE YLLNVANFPL FSPIPFVEKG
1001: IPGLFKVCIK ILAANLQDQL PEELIFRSIT IMWKIDKEII DTCYDTITEF VSRIITDHSA SLQTQIGWKS VLQLLSLCGR HPETKEQAVD ALIGLMSTNA
1101: SHLSQSSYAY CIDCSFSFVA LRNSAVEKNL TILDLMTESV TMLIQWYKTA STETVNNFSV ASNTSSSSSV EENSLRGVNF VHHLFLKLSE AFRKTTLARR
1201: EEIRNRAVTS LERSFTMAHE DLGFTPSGCI YCIDHVIFPT IDDLHEKLLD YSRRESAERE MRSMEGTLKI AMKMLKNVFL HYLEQIVGSA EFRTFWLGVL
1301: RRMDTCMKAD LGEYGDNKLQ EVVPELLTIM IGTMKEKEIL VQKEDDDLWE ITYIQIQWIA PSLKDELFPD EDM
0001: MDRIAVRAKR KELGISCMLN TEVGAVLAVI RRPLSESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQDWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
Arabidopsis Description
GNL2ARF guanine-nucleotide exchange factor GNL2 [Source:UniProtKB/Swiss-Prot;Acc:F4K2K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.