Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019795 | Potato | cytosol | 87.92 | 97.54 |
| VIT_11s0016g04100.t01 | Wine grape | cytosol | 62.92 | 69.35 |
| CDY58967 | Canola | cytosol | 57.83 | 64.53 |
| Bra002249.1-P | Field mustard | cytosol | 57.77 | 64.46 |
| CDX92516 | Canola | cytosol | 57.77 | 64.46 |
| AT5G19610.1 | Thale cress | cytosol | 57.57 | 64.15 |
| KRH39264 | Soybean | cytosol | 57.18 | 63.8 |
| GSMUA_Achr1P23070_001 | Banana | cytosol, nucleus, peroxisome | 39.88 | 60.02 |
| KRH48417 | Soybean | cytosol | 36.75 | 58.1 |
| TraesCS3A01G245300.1 | Wheat | cytosol | 51.37 | 56.78 |
| TraesCS3D01G246200.1 | Wheat | cytosol | 51.44 | 56.73 |
| TraesCS3B01G274600.1 | Wheat | cytosol | 51.31 | 56.63 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 51.17 | 56.57 |
| Zm00001d041752_P001 | Maize | cytosol | 50.65 | 55.04 |
| EES17039 | Sorghum | cytosol | 50.72 | 55.03 |
| Os04t0117300-01 | Rice | cytosol, plasma membrane | 23.63 | 53.47 |
| Solyc04g005560.2.1 | Tomato | nucleus | 37.34 | 39.64 |
| Solyc05g013040.2.1 | Tomato | cytosol | 36.88 | 38.99 |
| Solyc02g088290.2.1 | Tomato | cytosol | 34.92 | 37.94 |
| Solyc02g067010.2.1 | Tomato | cytosol | 34.92 | 36.95 |
| Solyc01g112350.2.1 | Tomato | extracellular, golgi, plasma membrane | 15.01 | 16.76 |
| Solyc01g091460.2.1 | Tomato | extracellular | 18.54 | 15.97 |
| Solyc12g017830.1.1 | Tomato | plastid | 15.93 | 13.79 |
| Solyc01g112340.2.1 | Tomato | plastid | 3.72 | 13.64 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009846 | GO:GO:0009856 | GO:GO:0009987 | GO:GO:0016192 | GO:GO:0032012 |
| GO:GO:0065009 | GO:GO:0090406 | InterPro:IPR000904 | InterPro:IPR023394 | UniProt:K4BHH6 | PFAM:PF01369 |
| PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF2 | SMART:SM00222 | SUPFAM:SSF48371 |
| SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf | EnsemblPlantsGene:Solyc03g070470.1 |
| EnsemblPlants:Solyc03g070470.1.1 | UniParc:UPI0002767BBF | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3:+:16375518..16381950
Molecular Weight (calculated)
172734.0 Da
IEP (calculated)
4.688
GRAVY (calculated)
-0.175
Length
1532 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPEEEFGATF NKVGTTNNRA SGYNEVGETT FNGVDVSLNT TSNIPSTFNP IVSNTSNTDP SDSEDSEYAV KEFDESTEES DDSEDNELLE DDQYGGDVHE
0101: ELIQLRVEKR SFPRKRKRRE RIPGDTEKVP CGNVGADLGF HETTINTGTL EGMLGEGDEN SHEYMTKIKR KELGISCTLN TEVGAVLAVI RRSPEGNLHF
0201: YHPPEENYDS QISLSLKSLR SLIFNPQQEW LTIDPMIYLS PFLDVVQSDD VPSAATAVAL SSILKILKLE IFYHKSPGAR EAINSAVTAV TGCRLEKTDP
0301: VSEDAVMMKI LQALTAIMNH PSSVLLTDQS VCTVVNTCFQ VVQQSANRSD LLQRSARYTM HELIHVVYQR LPEIEVKDWE DSESDTEDGI LDSGYGILSA
0401: VDIFHFLCSL LNVVEVMETD GSTPQTSDEN VQLFALVLIN SAIELSGDSI GKHQKLLRMI QDDLFHHLVH YGTSSNPIVA SMICSIVLNI YHFLRRSVRL
0501: QLEAFFSFVL LKVASLANSL QLQEVAIEGM INFCRQPSFI VEVYINYDCH PMFKNVFEEI GKSLCRHAFP TGGCLTSLQV QAFEGLAVII HNIADNVDKE
0601: DDLTPSGPYP VEISEYRQFW EEKSKEDEED LENWIDFIRV RMAQKRKILI AGNHFSRDEK KGLEYLKLSL LIPDPPDPKA YAMFFRYTPG LNKVAIGDFL
0701: GDPDDFYLQV LKEFTETFEF MGMVLDTALR TYLETFRLPG ESQKIQRILE AFAERFFDQQ SSEIFASKDA VLILCYSVIM LNTDQHNPQV KKKMTEDEFI
0801: RNNRGINGGQ DLPREYLSEF FHSISVNAIT LFGSSGAPVE MNPSRWIQLI NKSRKMKPFI FTNFDRRLGR DMFASIAGPT VSTLATIFEQ SDEEEILHEC
0901: VEALFSIARI TKYGLEDTLD ELLCSFCKFT TLLNPYASSE ETLYAFSNDM KPRMATLAVF TIANDFKKSI RGAWRTIVDC LLKLRKLKLL PQSVVEPENA
1001: SNSSSNPPGI HERCASGVVF PTQDVKFGSK AQNSGIIGRF SHFLSMETVE ESLNLGVSEF EQNLKVIQQC RIGSIFSNSS SLPDEPLLNL GRCLIFAAAG
1101: KGQKFSTPIE EEETVGFCWD LIVSIASSNT NRLLVFWPHY NEYLLDVAQF PLFSPIPFAE KGIIALMKIC LKLLSSFHSD KSPEELMFKS INLMWKLEKE
1201: ILDTCSDFIV QSVTTILTEY PANLQSQLGW KTVMHLLSVT GRHPETYEQG VEALINLMSD GFHISRLNYP YCIDCAFGFV ALKNSPLEKN MKIMDLMSDT
1301: VNLLVQWYKS GYTDPGSSTS INSSASSCSL EESSKALSSS NLTVTYFAKL GEAFRKTSLA RREEIRNHAV MSLQKSFALG EELYFSPANI LSCFNLILFA
1401: MVDDLHEKML EYSKRGNAER EARSMEGTLK LSMEVLTEVY LQFLKPLSES PSFRAFWMGI LRRMDTCMKA DLGDCGESKL PHTIPVLLKK MVITMKQKEI
1501: LVPGDDEDLW EMTHVQIQWI APSLTEELFS DV
0101: ELIQLRVEKR SFPRKRKRRE RIPGDTEKVP CGNVGADLGF HETTINTGTL EGMLGEGDEN SHEYMTKIKR KELGISCTLN TEVGAVLAVI RRSPEGNLHF
0201: YHPPEENYDS QISLSLKSLR SLIFNPQQEW LTIDPMIYLS PFLDVVQSDD VPSAATAVAL SSILKILKLE IFYHKSPGAR EAINSAVTAV TGCRLEKTDP
0301: VSEDAVMMKI LQALTAIMNH PSSVLLTDQS VCTVVNTCFQ VVQQSANRSD LLQRSARYTM HELIHVVYQR LPEIEVKDWE DSESDTEDGI LDSGYGILSA
0401: VDIFHFLCSL LNVVEVMETD GSTPQTSDEN VQLFALVLIN SAIELSGDSI GKHQKLLRMI QDDLFHHLVH YGTSSNPIVA SMICSIVLNI YHFLRRSVRL
0501: QLEAFFSFVL LKVASLANSL QLQEVAIEGM INFCRQPSFI VEVYINYDCH PMFKNVFEEI GKSLCRHAFP TGGCLTSLQV QAFEGLAVII HNIADNVDKE
0601: DDLTPSGPYP VEISEYRQFW EEKSKEDEED LENWIDFIRV RMAQKRKILI AGNHFSRDEK KGLEYLKLSL LIPDPPDPKA YAMFFRYTPG LNKVAIGDFL
0701: GDPDDFYLQV LKEFTETFEF MGMVLDTALR TYLETFRLPG ESQKIQRILE AFAERFFDQQ SSEIFASKDA VLILCYSVIM LNTDQHNPQV KKKMTEDEFI
0801: RNNRGINGGQ DLPREYLSEF FHSISVNAIT LFGSSGAPVE MNPSRWIQLI NKSRKMKPFI FTNFDRRLGR DMFASIAGPT VSTLATIFEQ SDEEEILHEC
0901: VEALFSIARI TKYGLEDTLD ELLCSFCKFT TLLNPYASSE ETLYAFSNDM KPRMATLAVF TIANDFKKSI RGAWRTIVDC LLKLRKLKLL PQSVVEPENA
1001: SNSSSNPPGI HERCASGVVF PTQDVKFGSK AQNSGIIGRF SHFLSMETVE ESLNLGVSEF EQNLKVIQQC RIGSIFSNSS SLPDEPLLNL GRCLIFAAAG
1101: KGQKFSTPIE EEETVGFCWD LIVSIASSNT NRLLVFWPHY NEYLLDVAQF PLFSPIPFAE KGIIALMKIC LKLLSSFHSD KSPEELMFKS INLMWKLEKE
1201: ILDTCSDFIV QSVTTILTEY PANLQSQLGW KTVMHLLSVT GRHPETYEQG VEALINLMSD GFHISRLNYP YCIDCAFGFV ALKNSPLEKN MKIMDLMSDT
1301: VNLLVQWYKS GYTDPGSSTS INSSASSCSL EESSKALSSS NLTVTYFAKL GEAFRKTSLA RREEIRNHAV MSLQKSFALG EELYFSPANI LSCFNLILFA
1401: MVDDLHEKML EYSKRGNAER EARSMEGTLK LSMEVLTEVY LQFLKPLSES PSFRAFWMGI LRRMDTCMKA DLGDCGESKL PHTIPVLLKK MVITMKQKEI
1501: LVPGDDEDLW EMTHVQIQWI APSLTEELFS DV
0001: MDRIAVRAKR KELGISCMLN TEVGAVLAVI RRPLSESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQDWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
Arabidopsis Description
GNL2ARF guanine-nucleotide exchange factor GNL2 [Source:UniProtKB/Swiss-Prot;Acc:F4K2K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.