Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G274600.1 | Wheat | cytosol | 83.9 | 40.92 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 83.75 | 40.91 |
| TraesCS3D01G246200.1 | Wheat | cytosol | 83.75 | 40.82 |
| TraesCS3A01G245300.1 | Wheat | cytosol | 83.31 | 40.69 |
| Zm00001d041752_P001 | Maize | cytosol | 83.16 | 39.93 |
| EES17039 | Sorghum | cytosol | 82.57 | 39.59 |
| GSMUA_Achr1P23070_001 | Banana | cytosol, nucleus, peroxisome | 57.46 | 38.21 |
| VIT_11s0016g04100.t01 | Wine grape | cytosol | 54.8 | 26.69 |
| PGSC0003DMT400019795 | Potato | cytosol | 54.06 | 26.5 |
| Bra002249.1-P | Field mustard | cytosol | 53.47 | 26.37 |
| CDX92516 | Canola | cytosol | 53.47 | 26.37 |
| CDY58967 | Canola | cytosol | 53.32 | 26.29 |
| AT5G19610.1 | Thale cress | cytosol | 52.88 | 26.04 |
| KRH39264 | Soybean | cytosol | 52.14 | 25.71 |
| Solyc03g070470.1.1 | Tomato | nucleus | 53.47 | 23.63 |
| Os03t0666100-00 | Rice | extracellular, golgi | 31.17 | 17.42 |
| Os03t0246800-02 | Rice | plasma membrane | 18.17 | 17.28 |
| KRH48417 | Soybean | cytosol | 23.19 | 16.2 |
| Os02t0326600-01 | Rice | cytosol, plasma membrane | 19.2 | 13.05 |
| Os06t0622800-01 | Rice | plasma membrane | 0.15 | 0.15 |
| Os07t0564700-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os02t0193800-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | EMBL:AK109864 | InterPro:ARM-type_fold | UniProt:B7F2T8 |
| ProteinID:BAS87621.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 |
| GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009846 | GO:GO:0009856 |
| GO:GO:0009987 | GO:GO:0016192 | GO:GO:0032012 | GO:GO:0090406 | InterPro:IPR000904 | InterPro:IPR023394 |
| EnsemblPlantsGene:Os04g0117300 | EnsemblPlants:Os04t0117300-01 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 |
| PANTHER:PTHR44190:SF2 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N |
| InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI000188AF43 | SEG:seg | : | : |
Description
Similar to H0207B04.10 protein. (Os04t0117300-01);SEC7-like domain containing protein. (Os04t0117300-02)
Coordinates
chr4:-:1024132..1026339
Molecular Weight (calculated)
74612.0 Da
IEP (calculated)
5.233
GRAVY (calculated)
0.063
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MARTAAAAVS DDDDDGPPAY TVPRGPRRDP RLKDLGISCM LNTEVAALLA VIRRRPDPYS YLPPAVAAAE EATFAGLIQS LKNLRGLLFQ PRHGAWRCSD
101: PAMYLKPFLD VVQSEESPPA ATGVALSSVL KILRIDVFDE CSPGARDAIQ AVLTAVSSCR VERIADPGAE EAVLLRVLQV LAALLRARAA PLLSDHAVCN
201: AVNTCFQVVQ HAASGRGSEL LQRTARHCMH EILQAVFARL PDIPAADAAD ADDLSVAGFG ARCMADIFNF LCTLLLNAPD MVATGDGHGA FITEEDVQLF
301: SLVLINSAIE LGGEAIGKHP KLLRLIQDDL FYHLIHYATE SSPLVLSMIC STALNLYHFL RRFLKLQLEA FFMYVLLRLC GGGGGAQLQE VAIEGLISFC
401: RQPTFVIEMY VNYDCDPMLR NVYEEVGKLL CKAAFPASSP MTTVQLQAFE GLVNMLTTIA DNVEVDKAPD HAAYAVDISD YRLFWVERWD AAAAGGSGNN
501: ETWVDFVRKR KLRKKKVAIA ANHYNRDEKK GMEYLRLSQL VPTPPEPRSM AFFLRYSPGL DKNKIGELLG DPEEQSLRVL KEFTETFDFT GVILDTALRT
601: YLETFRLPGE SQKIQRILEA FSERFYEQQT AEVFATKDAA FILCYSLIML NTDLHNPQVG VQVGLSANPL IDKISTI
101: PAMYLKPFLD VVQSEESPPA ATGVALSSVL KILRIDVFDE CSPGARDAIQ AVLTAVSSCR VERIADPGAE EAVLLRVLQV LAALLRARAA PLLSDHAVCN
201: AVNTCFQVVQ HAASGRGSEL LQRTARHCMH EILQAVFARL PDIPAADAAD ADDLSVAGFG ARCMADIFNF LCTLLLNAPD MVATGDGHGA FITEEDVQLF
301: SLVLINSAIE LGGEAIGKHP KLLRLIQDDL FYHLIHYATE SSPLVLSMIC STALNLYHFL RRFLKLQLEA FFMYVLLRLC GGGGGAQLQE VAIEGLISFC
401: RQPTFVIEMY VNYDCDPMLR NVYEEVGKLL CKAAFPASSP MTTVQLQAFE GLVNMLTTIA DNVEVDKAPD HAAYAVDISD YRLFWVERWD AAAAGGSGNN
501: ETWVDFVRKR KLRKKKVAIA ANHYNRDEKK GMEYLRLSQL VPTPPEPRSM AFFLRYSPGL DKNKIGELLG DPEEQSLRVL KEFTETFDFT GVILDTALRT
601: YLETFRLPGE SQKIQRILEA FSERFYEQQT AEVFATKDAA FILCYSLIML NTDLHNPQVG VQVGLSANPL IDKISTI
0001: MDRIAVRAKR KELGISCMLN TEVGAVLAVI RRPLSESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQDWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
Arabidopsis Description
GNL2ARF guanine-nucleotide exchange factor GNL2 [Source:UniProtKB/Swiss-Prot;Acc:F4K2K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.