Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
18260611
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0326600-01 | |
| Os03t0666100-00 | |
| Os06t0708400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G017750.4 | Barley | cytosol | 80.32 | 80.97 |
| TraesCS5D01G370200.1 | Wheat | cytosol | 90.16 | 65.5 |
| EER91946 | Sorghum | plastid | 89.76 | 62.69 |
| Zm00001d047092_P001 | Maize | mitochondrion, plastid | 88.05 | 61.67 |
| Zm00001d029910_P001 | Maize | plastid | 87.95 | 61.43 |
| TraesCS3A01G098600.1 | Wheat | cytosol, plastid | 81.93 | 58.83 |
| TraesCS3B01G114200.1 | Wheat | plastid | 81.73 | 57.89 |
| Os03t0666100-00 | Rice | extracellular, golgi | 66.77 | 54.91 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 63.45 | 54.58 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 67.17 | 45.51 |
| PGSC0003DMT400072858 | Potato | cytosol | 65.66 | 45.13 |
| Solyc04g005560.2.1 | Tomato | nucleus | 65.26 | 45.05 |
| Solyc05g013040.2.1 | Tomato | cytosol | 65.46 | 45.0 |
| AT1G13980.1 | Thale cress | cytosol | 65.16 | 44.73 |
| Bra019694.1-P | Field mustard | cytosol | 64.96 | 44.68 |
| CDX98140 | Canola | cytosol | 64.96 | 44.68 |
| CDY36422 | Canola | cytosol | 64.86 | 44.58 |
| KRG97867 | Soybean | cytosol | 65.56 | 44.33 |
| KRH31013 | Soybean | cytosol | 54.92 | 43.34 |
| KRH15072 | Soybean | cytosol | 62.75 | 42.29 |
| KRH73064 | Soybean | cytosol | 62.25 | 42.12 |
| KRG97865 | Soybean | cytosol | 60.64 | 41.0 |
| KRH31014 | Soybean | nucleus | 60.34 | 40.8 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 28.61 | 34.76 |
| Os04t0117300-01 | Rice | cytosol, plasma membrane | 13.05 | 19.2 |
| Os06t0622800-01 | Rice | plasma membrane | 7.73 | 11.31 |
| Os03t0246800-02 | Rice | plasma membrane | 7.03 | 9.83 |
| Os02t0193800-01 | Rice | cytosol | 1.1 | 4.68 |
| Os07t0564700-01 | Rice | plasma membrane | 1.2 | 3.49 |
| CDY69502 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | ProteinID:BAF08621.2 | ProteinID:BAS78414.1 |
| GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016192 | GO:GO:0032012 | InterPro:IPR000904 |
| InterPro:IPR023394 | EnsemblPlantsGene:Os02g0326600 | EnsemblPlants:Os02t0326600-01 | PFAM:PF01369 | PFscan:PS50190 | PANTHER:PTHR44190 |
| PANTHER:PTHR44190:SF3 | UniProt:Q0E1L7 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf |
| InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI0001B65DAF | SEG:seg | : | : |
Description
Similar to Pattern formation protein EMB30. (Os02t0326600-01)
Coordinates
chr2:+:13146575..13149697
Molecular Weight (calculated)
112804.0 Da
IEP (calculated)
5.807
GRAVY (calculated)
-0.138
Length
996 amino acids
Sequence
(BLAST)
(BLAST)
001: DFCRQKEFMA EMYANMDCDL QSSNIFEDLA NLLSKSAFPV KSPLSTLNVL ALDGLVLVIQ AIAERTDNAP QHHEQTVPEI SEYFPFWQLK CENTNDPDQW
101: VRFVHQQKSI KRKLMVGVEH FNRDKKKGFE YLQGAHLLPE RLDPRSVALF FRYTPGLDKN LLGDYLGNHD EFSILVLHEF AKTFDFKEMN LDAALRLFLE
201: TFRLPGESQK IQRILEAFSE RYYEQSPQMF VNRDAALVLS YSVIMLNTDQ HNIRVKKKMT EEDFIKNNRR INGGNDLPRE FLSELYYSIC RNEIRTIPEQ
301: GAGCSEMSFS RWVDLMWKSK RTSAYIACDS FPFLDHDMFT IMAGPTVAAI SVVFDNVEHE EFLTGCINGF LSVAKLAAFY HLDDVLNDLV VALCKFTTLL
401: NTSYINDPVT TFGEDTKARM ATEAVFTIAT THGDHIRSGW RNIVDCILRL HKISLLPGCL TGDTADDQES SSDMLPSKLA SSRAAPQVVP ISTPKKSYGL
501: MGRFSQLLYL DAEESRFQPT EEQLAAQRNA SETIKKCQIG TIFTESKFLQ ADSLLNLARA LTQAAGRPQR ITSSLDDEST SVFCLELLIT VTLNNRDRIV
601: LLWQGVFEHI THIVQSTVMP CNLVEKAVFG LLHICQRLLP YKENLVDDLL RSLQLILKLD ARVADAYCEN ITQEVTRLVK GNATHIKSQM GWRTIISLLC
701: ITARHPDASD VGFEALVFIM SEGAHLSPAN FVLSVEASRQ FAESRLGSAE RSIHALNLMA ESVNCLTRWS REVKEAGGEA DRILEGIAEM WLRLVQALRK
801: VCTDQREEVR NHALLSLHRC LVVDGISVPS SAWLMSFDII FQLLDELLEI AQNYSPKDFR NMEVSLLHAV KLLCKVFLQS LNDISSQSSF SKLWLEVLDM
901: IEKLMKVKVR GRRTEKLQEV IPELLKNILL VLKANRVLSK TSTSEENSLW EATWLQVNKI APSLQPEVFP DSEGDVATQS AKNKSDSPAQ SEGVNV
101: VRFVHQQKSI KRKLMVGVEH FNRDKKKGFE YLQGAHLLPE RLDPRSVALF FRYTPGLDKN LLGDYLGNHD EFSILVLHEF AKTFDFKEMN LDAALRLFLE
201: TFRLPGESQK IQRILEAFSE RYYEQSPQMF VNRDAALVLS YSVIMLNTDQ HNIRVKKKMT EEDFIKNNRR INGGNDLPRE FLSELYYSIC RNEIRTIPEQ
301: GAGCSEMSFS RWVDLMWKSK RTSAYIACDS FPFLDHDMFT IMAGPTVAAI SVVFDNVEHE EFLTGCINGF LSVAKLAAFY HLDDVLNDLV VALCKFTTLL
401: NTSYINDPVT TFGEDTKARM ATEAVFTIAT THGDHIRSGW RNIVDCILRL HKISLLPGCL TGDTADDQES SSDMLPSKLA SSRAAPQVVP ISTPKKSYGL
501: MGRFSQLLYL DAEESRFQPT EEQLAAQRNA SETIKKCQIG TIFTESKFLQ ADSLLNLARA LTQAAGRPQR ITSSLDDEST SVFCLELLIT VTLNNRDRIV
601: LLWQGVFEHI THIVQSTVMP CNLVEKAVFG LLHICQRLLP YKENLVDDLL RSLQLILKLD ARVADAYCEN ITQEVTRLVK GNATHIKSQM GWRTIISLLC
701: ITARHPDASD VGFEALVFIM SEGAHLSPAN FVLSVEASRQ FAESRLGSAE RSIHALNLMA ESVNCLTRWS REVKEAGGEA DRILEGIAEM WLRLVQALRK
801: VCTDQREEVR NHALLSLHRC LVVDGISVPS SAWLMSFDII FQLLDELLEI AQNYSPKDFR NMEVSLLHAV KLLCKVFLQS LNDISSQSSF SKLWLEVLDM
901: IEKLMKVKVR GRRTEKLQEV IPELLKNILL VLKANRVLSK TSTSEENSLW EATWLQVNKI APSLQPEVFP DSEGDVATQS AKNKSDSPAQ SEGVNV
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.