Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013590_P001 | |
| Zm00001d014731_P017 | |
| Zm00001d029910_P001 | |
| Zm00001d047092_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91946 | Sorghum | plastid | 96.13 | 95.86 |
| Zm00001d029910_P001 | Maize | plastid | 94.23 | 93.97 |
| Os02t0326600-01 | Rice | cytosol, plasma membrane | 61.67 | 88.05 |
| TraesCS5A01G361300.1 | Wheat | cytosol | 79.32 | 87.99 |
| TraesCS5D01G370200.1 | Wheat | cytosol | 83.83 | 86.94 |
| TraesCS5B01G363900.1 | Wheat | cytosol, plasma membrane | 85.72 | 86.21 |
| HORVU5Hr1G088970.4 | Barley | plastid | 77.5 | 83.87 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 54.29 | 66.67 |
| KRH31013 | Soybean | cytosol | 55.2 | 62.2 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 35.72 | 61.95 |
| Solyc05g013040.2.1 | Tomato | cytosol | 62.59 | 61.42 |
| PGSC0003DMT400072858 | Potato | cytosol | 62.59 | 61.42 |
| Solyc04g005560.2.1 | Tomato | nucleus | 62.31 | 61.4 |
| Zm00001d013590_P001 | Maize | mitochondrion | 60.83 | 61.13 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 62.73 | 60.68 |
| KRG97867 | Soybean | cytosol | 62.45 | 60.29 |
| AT1G13980.1 | Thale cress | cytosol | 61.39 | 60.17 |
| CDX98140 | Canola | cytosol | 61.25 | 60.15 |
| Bra019694.1-P | Field mustard | cytosol | 61.11 | 60.01 |
| CDY36422 | Canola | cytosol | 61.11 | 59.97 |
| KRH15072 | Soybean | cytosol | 59.92 | 57.65 |
| KRH73064 | Soybean | cytosol | 59.35 | 57.34 |
| KRG97865 | Soybean | cytosol | 59.07 | 57.03 |
| KRH31014 | Soybean | nucleus | 58.58 | 56.55 |
| CDY69502 | Canola | cytosol | 8.51 | 45.66 |
| Zm00001d041752_P001 | Maize | cytosol | 37.06 | 37.38 |
| Zm00001d053688_P002 | Maize | plastid | 21.52 | 18.07 |
| Zm00001d028438_P002 | Maize | plastid | 22.22 | 17.6 |
| Zm00001d046717_P009 | Maize | plastid | 20.46 | 16.96 |
| Zm00001d021806_P005 | Maize | cytosol | 19.97 | 16.5 |
| Zm00001d006607_P066 | Maize | cytosol | 19.83 | 16.43 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | UniProt:A0A1D6P6X7 | ProteinID:AQL05593.1 | InterPro:ARM-type_fold |
| GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0032012 | GO:GO:0065009 | InterPro:IPR000904 | InterPro:IPR023394 |
| PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF3 | SMART:SM00222 |
| SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf |
| UniParc:UPI00084524BD | EnsemblPlantsGene:Zm00001d047092 | EnsemblPlants:Zm00001d047092_P001 | EnsemblPlants:Zm00001d047092_T001 | SEG:seg | : |
Description
ARF guanine-nucleotide exchange factor GNOM
Coordinates
chr9:+:118307186..118312279
Molecular Weight (calculated)
158958.0 Da
IEP (calculated)
5.514
GRAVY (calculated)
-0.020
Length
1422 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGGLRAASPS VAGSRAVAGV GSDYAAQRLA MACVLASEAA TVLAVMRRNV RWADVRYGGA GDDEHLDHPL VAGLKALRRR AAAWGHGRWT GVEPLLYLRP
0101: FLDVVRSDET GAPITGAALS SLHKILTLDL VGPGAPGAAE AMAAVVDAVT ACRFEVIDPA SEEAVLARVL QVLLACVRSR AALALANRHV CTIVNTCFRV
0201: VQQAGTKGEL LQRVSRQTMQ EVIRTVFARL QDIDVTALSD EQVVGCKNQI LGAEETENGK SDYVCLNNSG DEVGDGSGVV EDKDLMEPFG VPCMVEILQF
0301: LCSLLNIAED IEVNPRMNPI DFDEDVPLFA LGLINSAIEL SASSIHRHKK LLAFVQDELF HNLMHFGLSM SPLILSTVCS IVFTLFYHLR HELKLQIEAF
0401: FSCVILRLAQ SRYGASYQQQ EVALEALIDF CRQKEFMAEM YANMDCDLQC SNIFEELANL LSKSAFPVNS PLSALNVLAL DGLVAVIQAM AQRTDNAPQH
0501: HEQTVPEISE YFPFWQLKCE SSNDPDQWVK FVHQQKSIKR KLMVGVEHFN RDKKKGFEYL QGVHLLPEKL DPHNVALFFR YTHGLDKYLL GDYLGNHDEF
0601: SIRVLHEFAR TFDFKDMNLD AALRLFLETF RLPGESQKIQ RILEAFSERY YEQSPHMFVN RDAALVLSYS VILLNTDQHN VRVKKKMTEE DFIRNNRHIN
0701: GGNDLPREFL SELYYSICRN EIRTIPEQGA GCSEMSFSRW VDLMWRSKRT SMYIACSSYP FLDHDMFSVM AGPTVAAVSV VFDNVEHEEV LTGCIDGFLS
0801: VAKLAAFYHL GDVLNDLVVA LSKFTTLLTT SYIDDPVTAF GEDTKARMAT EAVFTIATVY GDHIRSGWRN IIDCILRLHK IGLLPGPLTG DTADDQDSSS
0901: KSLPGKLASS APQVLPISTS RKTYGLMGRF SQLLYLDADE PRSQPTEEQL AAQRNASETV KKCQIGTIFT ESKFLQADSL SNLARALIQA AGRPQKISSS
1001: LDDEGIAVFC LELLITVTLN NRDRIVLLWQ DVFEHITHIV QSTVMPCNLV EKAVFGLLHI CQRLLPYKAN LVDDLLRSLQ LILKLDARVA DAYCENITLE
1101: VTLLVKANAT HIKSQMGWRT IISLLCITAR HPDASDAGFE ALVFIMSEGA HLSPANFILS VEASRQFAES RLGSAERSIH ALNLMADSVN CLMRWSQEVR
1201: EAGGEADRIL EGIAEMWLRL VQALRKVCMD QREEVRNHAL LSLHRCLVVD GILVKSSTWL MAFDIIFQLL DELLEIAQSY PPKDFRNMEV SLLHAIKLLC
1301: KVFLQSLKDL SEQGSFDKLW WEVLDMIEKF MKVKVRGRRT EKLKEAIPEL VKNILMVMKA SGVLSKTGAS ENSFWEATWL QVNKIAPSLQ SEFFPDNEDG
1401: STTQIEENKL DTQAQSDQNN DQ
0101: FLDVVRSDET GAPITGAALS SLHKILTLDL VGPGAPGAAE AMAAVVDAVT ACRFEVIDPA SEEAVLARVL QVLLACVRSR AALALANRHV CTIVNTCFRV
0201: VQQAGTKGEL LQRVSRQTMQ EVIRTVFARL QDIDVTALSD EQVVGCKNQI LGAEETENGK SDYVCLNNSG DEVGDGSGVV EDKDLMEPFG VPCMVEILQF
0301: LCSLLNIAED IEVNPRMNPI DFDEDVPLFA LGLINSAIEL SASSIHRHKK LLAFVQDELF HNLMHFGLSM SPLILSTVCS IVFTLFYHLR HELKLQIEAF
0401: FSCVILRLAQ SRYGASYQQQ EVALEALIDF CRQKEFMAEM YANMDCDLQC SNIFEELANL LSKSAFPVNS PLSALNVLAL DGLVAVIQAM AQRTDNAPQH
0501: HEQTVPEISE YFPFWQLKCE SSNDPDQWVK FVHQQKSIKR KLMVGVEHFN RDKKKGFEYL QGVHLLPEKL DPHNVALFFR YTHGLDKYLL GDYLGNHDEF
0601: SIRVLHEFAR TFDFKDMNLD AALRLFLETF RLPGESQKIQ RILEAFSERY YEQSPHMFVN RDAALVLSYS VILLNTDQHN VRVKKKMTEE DFIRNNRHIN
0701: GGNDLPREFL SELYYSICRN EIRTIPEQGA GCSEMSFSRW VDLMWRSKRT SMYIACSSYP FLDHDMFSVM AGPTVAAVSV VFDNVEHEEV LTGCIDGFLS
0801: VAKLAAFYHL GDVLNDLVVA LSKFTTLLTT SYIDDPVTAF GEDTKARMAT EAVFTIATVY GDHIRSGWRN IIDCILRLHK IGLLPGPLTG DTADDQDSSS
0901: KSLPGKLASS APQVLPISTS RKTYGLMGRF SQLLYLDADE PRSQPTEEQL AAQRNASETV KKCQIGTIFT ESKFLQADSL SNLARALIQA AGRPQKISSS
1001: LDDEGIAVFC LELLITVTLN NRDRIVLLWQ DVFEHITHIV QSTVMPCNLV EKAVFGLLHI CQRLLPYKAN LVDDLLRSLQ LILKLDARVA DAYCENITLE
1101: VTLLVKANAT HIKSQMGWRT IISLLCITAR HPDASDAGFE ALVFIMSEGA HLSPANFILS VEASRQFAES RLGSAERSIH ALNLMADSVN CLMRWSQEVR
1201: EAGGEADRIL EGIAEMWLRL VQALRKVCMD QREEVRNHAL LSLHRCLVVD GILVKSSTWL MAFDIIFQLL DELLEIAQSY PPKDFRNMEV SLLHAIKLLC
1301: KVFLQSLKDL SEQGSFDKLW WEVLDMIEKF MKVKVRGRRT EKLKEAIPEL VKNILMVMKA SGVLSKTGAS ENSFWEATWL QVNKIAPSLQ SEFFPDNEDG
1401: STTQIEENKL DTQAQSDQNN DQ
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.