Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013590_P001 | |
| Zm00001d014731_P017 | |
| Zm00001d029910_P001 | |
| Zm00001d047092_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37878 | Sorghum | cytosol | 95.83 | 96.1 |
| Os03t0666100-00 | Rice | extracellular, golgi | 77.17 | 90.17 |
| TraesCS4D01G016900.1 | Wheat | cytosol | 87.42 | 87.48 |
| TraesCS4A01G294900.1 | Wheat | cytosol | 87.21 | 87.15 |
| TraesCS4B01G018700.1 | Wheat | cytosol | 86.71 | 86.71 |
| HORVU4Hr1G002880.3 | Barley | cytosol | 77.03 | 76.65 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 60.07 | 73.4 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 71.94 | 69.25 |
| KRH31013 | Soybean | cytosol | 61.48 | 68.94 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 39.93 | 68.9 |
| AT1G13980.1 | Thale cress | cytosol | 70.04 | 68.3 |
| KRG97867 | Soybean | cytosol | 70.95 | 68.16 |
| Solyc04g005560.2.1 | Tomato | nucleus | 69.47 | 68.12 |
| PGSC0003DMT400072858 | Potato | cytosol | 69.75 | 68.12 |
| Solyc05g013040.2.1 | Tomato | cytosol | 69.54 | 67.91 |
| Bra019694.1-P | Field mustard | cytosol | 69.4 | 67.82 |
| CDX98140 | Canola | cytosol | 69.4 | 67.82 |
| CDY36422 | Canola | cytosol | 69.33 | 67.7 |
| KRH73064 | Soybean | cytosol | 65.51 | 62.98 |
| KRH15072 | Soybean | cytosol | 65.51 | 62.72 |
| KRG97865 | Soybean | cytosol | 63.75 | 61.24 |
| Zm00001d029910_P001 | Maize | plastid | 61.55 | 61.08 |
| Zm00001d047092_P001 | Maize | mitochondrion, plastid | 61.13 | 60.83 |
| KRH31014 | Soybean | nucleus | 63.18 | 60.69 |
| CDY69502 | Canola | cytosol | 7.84 | 41.89 |
| Zm00001d041752_P001 | Maize | cytosol | 39.51 | 39.65 |
| Zm00001d053688_P002 | Maize | plastid | 21.63 | 18.07 |
| Zm00001d046717_P009 | Maize | plastid | 21.55 | 17.77 |
| Zm00001d028438_P002 | Maize | plastid | 22.33 | 17.6 |
| Zm00001d006607_P066 | Maize | cytosol | 19.15 | 15.79 |
| Zm00001d021806_P005 | Maize | cytosol | 19.01 | 15.63 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | EntrezGene:103626007 | MapMan:22.3.3.1 | UniProt:A0A1D6GKQ2 | ProteinID:AQK63911.1 |
| InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0032012 | GO:GO:0065009 | InterPro:IPR000904 |
| InterPro:IPR023394 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF3 |
| SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom |
| InterPro:Sec7_dom_sf | UniParc:UPI000221A1B1 | EnsemblPlantsGene:Zm00001d013590 | EnsemblPlants:Zm00001d013590_P001 | EnsemblPlants:Zm00001d013590_T001 | SEG:seg |
Description
ARF guanine-nucleotide exchange factor GNOM
Coordinates
chr5:-:14979300..14985450
Molecular Weight (calculated)
156680.0 Da
IEP (calculated)
6.108
GRAVY (calculated)
-0.015
Length
1415 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRPRMLTAA GGIDPIAEEP HHARSPADGG LGPDPAALAC AISAEASTVL AVMRRGLRHP RATAADDAAA EHPLVASLRG LRRLAFSPSP SAAAALPAAA
0101: LRPFLDAVRS EDAGAAATSA SLAALHEVMS LTGPALPGAA LREVVDAVAS CRFEAGTEPA AEEAVLMRML QALLACLRAP AAPALGDQHV CTAVNTCFRV
0201: VHQAAAKGEL LQRFSRHVMH ELIRCIFARL PQIGGADGVD GAVKPEMGGM DMNHPFGIKQ MENGNGSYVS ETGTSDENSA DGSGLVVEPY GVPCMVEIFH
0301: FLCSLLNVVE QIGLDEDLPL FALKLINSAI ELGGSSIQKH PKLLSLVQDE LFRNLMQFGL SMSPLILSIV CSIALNLYHH LRTELKLQLE AFFSCIIIRL
0401: AQPRFGATYH QQEVAMEALV DFCRQKNFMV EMYANLDCDI TCRNVFEELA NLLSKSAFPI NCPLSSMHIL ALEGLIAVIQ GMADRIGNAV SRPELLPVEL
0501: DEYTPFWTVK CENFSDPRHW VKFVRQRKYV KRRLMIGADH FNRDPKKGLE FLQGTHLLPE KLDPQSVACF FRYTAGLDKN LVGDFLGNHD EFCVQVLHEF
0601: AQTFDFQEMN LDTALRLFLE TFRLPGESQK IQRVLEAFSD RYYEQSPQSF ANKDTALLLS YSIIMLNTDQ HNMQVKKKMT EDDFIKNNRN INGGSDLPRE
0701: MLSELYHSIC RNEIKTTPEQ GLGYFEMSPS RWIDLMRKSK STSPYIIGDS QPFLDHDMFA VMSGPTIAAI AVVFDHSEHE EVLLTCIEGF LGVAKISAFH
0801: HLEDVLDDLV VSLCKFTTLL NTSLVEEPVT AFGDDLKARL ATETLFTIAN RYGDYIRTGW RNVLDCILRL HKLGLLPARV ASDAADDSEL PAEAVQRKAA
0901: PSSVPPSHIP VMGTPRKSSG LMGRFSQLLS LDSEEPRSQP TEQQLAAHQR TLQTIQKCRI DSIFTESKFL QPDSLLQLAK ALIWAAGRPQ KVASSPDDED
1001: TAVFCLELLI AITLNNRDRI VLLWQGVYEH IASIVQSTVM PCALVEKAIF GLLRICQRLL PYKENLADEL LRSLQLVLKL DARVADAYCE NITQEVARLV
1101: KANAAHIKSQ MGWRTVILLL SITARHPDAS EVGFEAIVFI MTEGAHLSLA NYGFCIDAAR QFAESRVGLA DRSVRALDLM SDSVRNLALW SQEIKATTFE
1201: EGEKGPEAIR EMWLRLLQAL KKLSLDQREE VRNHALASLQ RCLTSTGELC LQSATWSHAF DLVIFSLLDD LLEISQNHSQ KDYRNMEGSL VLAMKLVAKV
1301: YLQLLPDLFG LSSFCKLWLG VLSRMEKYVK VKVRGKRSDR LQEVVPDLLK NILLVMKSKG ILAKRSTIGG DSLWELTWLH ANNISTSLLP DVFPSQEYEQ
1401: QSSTGSPRGP SPVEA
0101: LRPFLDAVRS EDAGAAATSA SLAALHEVMS LTGPALPGAA LREVVDAVAS CRFEAGTEPA AEEAVLMRML QALLACLRAP AAPALGDQHV CTAVNTCFRV
0201: VHQAAAKGEL LQRFSRHVMH ELIRCIFARL PQIGGADGVD GAVKPEMGGM DMNHPFGIKQ MENGNGSYVS ETGTSDENSA DGSGLVVEPY GVPCMVEIFH
0301: FLCSLLNVVE QIGLDEDLPL FALKLINSAI ELGGSSIQKH PKLLSLVQDE LFRNLMQFGL SMSPLILSIV CSIALNLYHH LRTELKLQLE AFFSCIIIRL
0401: AQPRFGATYH QQEVAMEALV DFCRQKNFMV EMYANLDCDI TCRNVFEELA NLLSKSAFPI NCPLSSMHIL ALEGLIAVIQ GMADRIGNAV SRPELLPVEL
0501: DEYTPFWTVK CENFSDPRHW VKFVRQRKYV KRRLMIGADH FNRDPKKGLE FLQGTHLLPE KLDPQSVACF FRYTAGLDKN LVGDFLGNHD EFCVQVLHEF
0601: AQTFDFQEMN LDTALRLFLE TFRLPGESQK IQRVLEAFSD RYYEQSPQSF ANKDTALLLS YSIIMLNTDQ HNMQVKKKMT EDDFIKNNRN INGGSDLPRE
0701: MLSELYHSIC RNEIKTTPEQ GLGYFEMSPS RWIDLMRKSK STSPYIIGDS QPFLDHDMFA VMSGPTIAAI AVVFDHSEHE EVLLTCIEGF LGVAKISAFH
0801: HLEDVLDDLV VSLCKFTTLL NTSLVEEPVT AFGDDLKARL ATETLFTIAN RYGDYIRTGW RNVLDCILRL HKLGLLPARV ASDAADDSEL PAEAVQRKAA
0901: PSSVPPSHIP VMGTPRKSSG LMGRFSQLLS LDSEEPRSQP TEQQLAAHQR TLQTIQKCRI DSIFTESKFL QPDSLLQLAK ALIWAAGRPQ KVASSPDDED
1001: TAVFCLELLI AITLNNRDRI VLLWQGVYEH IASIVQSTVM PCALVEKAIF GLLRICQRLL PYKENLADEL LRSLQLVLKL DARVADAYCE NITQEVARLV
1101: KANAAHIKSQ MGWRTVILLL SITARHPDAS EVGFEAIVFI MTEGAHLSLA NYGFCIDAAR QFAESRVGLA DRSVRALDLM SDSVRNLALW SQEIKATTFE
1201: EGEKGPEAIR EMWLRLLQAL KKLSLDQREE VRNHALASLQ RCLTSTGELC LQSATWSHAF DLVIFSLLDD LLEISQNHSQ KDYRNMEGSL VLAMKLVAKV
1301: YLQLLPDLFG LSSFCKLWLG VLSRMEKYVK VKVRGKRSDR LQEVVPDLLK NILLVMKSKG ILAKRSTIGG DSLWELTWLH ANNISTSLLP DVFPSQEYEQ
1401: QSSTGSPRGP SPVEA
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.