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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_02s0012g01790.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G13980.1 VIT_02s0012g01790.t01 AT1G13980.1 10715321
AT1G13980.1 VIT_02s0012g01790.t01 AT1G13980.1 18203920
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH31013 Soybean cytosol 75.03 87.4
PGSC0003DMT400072858 Potato cytosol 82.45 83.64
AT1G13980.1 Thale cress cytosol 82.45 83.53
Solyc05g013040.2.1 Tomato cytosol 82.04 83.23
Solyc04g005560.2.1 Tomato nucleus 81.63 83.16
CDX98140 Canola cytosol 81.09 82.32
Bra019694.1-P Field mustard cytosol 81.02 82.25
CDY36422 Canola cytosol 81.02 82.19
KRH73064 Soybean cytosol 78.23 78.12
KRH15072 Soybean cytosol 78.44 78.01
Os03t0666100-00 Rice extracellular, golgi 62.65 76.05
GSMUA_Achr6P22810_001 Banana golgi 59.86 75.99
GSMUA_Achr6P03140_001 Banana cytosol, nucleus, plastid 41.97 75.24
KRG97865 Soybean cytosol 75.31 75.15
CDY69502 Canola cytosol 13.4 74.34
KRH31014 Soybean nucleus 74.49 74.34
Zm00001d013590_P001 Maize mitochondrion 69.25 71.94
KXG37878 Sorghum cytosol 69.05 71.93
TraesCS4D01G016900.1 Wheat cytosol 67.55 70.23
TraesCS4B01G018700.1 Wheat cytosol 67.42 70.04
TraesCS4A01G294900.1 Wheat cytosol 67.35 69.92
Os02t0326600-01 Rice cytosol, plasma membrane 45.51 67.17
TraesCS5A01G361300.1 Wheat cytosol 57.21 65.6
HORVU4Hr1G002880.3 Barley cytosol 62.52 64.63
TraesCS5D01G370200.1 Wheat cytosol 59.86 64.19
TraesCS5B01G363900.1 Wheat cytosol, plasma membrane 61.43 63.86
EER91946 Sorghum plastid 61.5 63.39
HORVU3Hr1G017750.4 Barley cytosol 42.38 63.06
Zm00001d047092_P001 Maize mitochondrion, plastid 60.68 62.73
Zm00001d029910_P001 Maize plastid 60.82 62.69
HORVU5Hr1G088970.4 Barley plastid 55.92 62.56
TraesCS3A01G098600.1 Wheat cytosol, plastid 57.41 60.85
TraesCS3B01G114200.1 Wheat plastid 57.62 60.24
VIT_11s0016g04100.t01 Wine grape cytosol 41.29 43.67
VIT_15s0048g00800.t01 Wine grape cytosol 22.72 18.77
VIT_03s0038g04090.t01 Wine grape mitochondrion, plasma membrane, plastid 21.7 18.74
VIT_11s0016g00170.t01 Wine grape cytosol, plastid 19.59 16.03
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20EntrezGene:100247152wikigene:100247152MapMan:22.3.3.1EMBL:AM461845
InterPro:ARM-type_foldProteinID:CAN61434ProteinID:CAN61434.1ProteinID:CCB57873ProteinID:CCB57873.1UniProt:F6HT63
EMBL:FN596247GO:GO:0000003GO:GO:0000911GO:GO:0001736GO:GO:0003674GO:GO:0003676
GO:GO:0005086GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0005886GO:GO:0006810
GO:GO:0006897GO:GO:0007049GO:GO:0007154GO:GO:0007155GO:GO:0007165GO:GO:0007275
GO:GO:0008150GO:GO:0008270GO:GO:0009605GO:GO:0009606GO:GO:0009653GO:GO:0009790
GO:GO:0009791GO:GO:0009793GO:GO:0009826GO:GO:0009880GO:GO:0009942GO:GO:0009987
GO:GO:0010087GO:GO:0010274GO:GO:0010311GO:GO:0010540GO:GO:0016020GO:GO:0016043
GO:GO:0016049GO:GO:0016192GO:GO:0030154GO:GO:0032012GO:GO:0032509GO:GO:0040007
GO:GO:0042802GO:GO:0042803GO:GO:0048765GO:GO:0065009GO:GO:0071555InterPro:IPR000904
InterPro:IPR023394EntrezGene:LOC100247152wikigene:LOC100247152PFAM:PF01369PFAM:PF12783PFscan:PS50190
PANTHER:PTHR44190PANTHER:PTHR44190:SF1SMART:SM00222SUPFAM:SSF48371SUPFAM:SSF48425InterPro:Sec7_C_sf
InterPro:Sec7_NInterPro:Sec7_domInterPro:Sec7_dom_sfUniParc:UPI0001982BD9ArrayExpress:VIT_02s0012g01790EnsemblPlantsGene:VIT_02s0012g01790
EnsemblPlants:VIT_02s0012g01790.t01unigene:Vvi.13791RefSeq:XP_002279665RefSeq:XP_002279665.1RefSeq:XP_010663244.1SEG:seg
Description
No Description!
Coordinates
chr2:+:8205082..8210973
Molecular Weight (calculated)
164349.0 Da
IEP (calculated)
5.926
GRAVY (calculated)
-0.090
Length
1470 amino acids
Sequence
(BLAST)
0001: MGRLKLQSGI KSIEEEPEDC ESTSSNKAAL ACMINSEVGA VLAVMRRNVR WGGRYMSGDD HLEHSLIQSL KALRKQIFSW QHQWHTINPA VYLQPFLDVI
0101: RSDETGAPIT GVALSSVYKI VTLDVLCLNT VNVEDAMHLV VDAVTSCRFE VTDPASEELV LMKILQVLLA CMKSKVSVML SNQHVCTIVN TCYRIVHQAA
0201: TKSELLQRIA RHTMHELVRC IFSHLPDVGN TEHALVNRGS SVKLEGSGQD NEYNFGNKQL ENGNGASEYD GQPSSVSFAS NSSTGLVGSM LDENTVGAGN
0301: GKEATPYDLH LMTEPYGVPC MVEIFHFLCS LLNVVEHMGM GSRSNTMAFD EDLPLFALGL INSAIELGGL SIRRHPRLLS LIQDELFRNL MQFGLSTSPL
0401: ILSMVCSIVL NLYQHLRTEL KLQLEAFFSC VILRLAQSKY GASYQQQEVA MEALVDFCRQ KTFMVEMYAN LDCDITCSNV FEDLANLLSK SAFPVNCPLS
0501: AMHILALDGL IAVIQGMAER IGNGSLGSEQ SPVNLEEYTP FWMVKCDNYS DPSVWVPFVC RRKYIKRRLM IGADHFNRDP KKGLEFLQVT HLLPDKLDPQ
0601: SVACFFRYTA GLDKNLVGDF LGNHDEFCVQ VLHEFAGTFD FQDMNLDTAL RLFLETFRLP GESQKIQRVL EAFSERYYEQ SPQILANKDA ALLLSYSLIM
0701: LNTDQHNVQV KKKMTEEDFI RNNRHINGGN DLPRDFLSEL YHSICKNEIR TTPEQGAGFP EMTPSRWIDL MHKSKKTAPF IVADSRAFLD HDMFAIMSGP
0801: TIAAISVVFD HAEHEEVYQT CIDGFLAVAK ISACHHLEDV LDDLVVSLCK FTTLLNPSPG EESVQAFGDD TKARMATVTV FTIANRYGDY IRTGWRNILD
0901: CILRLHKLGL LPARVASDAA DDSELSADPG QGKPITNSLS SAHMPSIGTP RRSSGLMGRF SQLLSLDTEE PRSQPTEQQL AAHQRTLQTI QKCHIDSIFT
1001: ESKFLQSDSL LQLARALIWA AGRPQKGNSS PEDEDTAVFC LELLIAITLN NRDRIKLLWQ GVYEHISNIV QSTVMPCALV EKAVFGLLRI CQRLLPYKEN
1101: LADELLRSLQ LVLKLDARVA DAYCEQITQE VSRLVKANAT HIRSQMGWRT ITSLLSITAR HPEASEAGFD ALLFIMSDGA HLLPANYVLC VDAARQFSES
1201: RVGQAERSVR ALDLMAGSVV CLSHWALEAK QAMAEEELSK MSQDIGEMWL RLVQGLRKVC LDQREEVRNH ALISLQRCLS GVEGFQLPHS LWLQCFDMVI
1301: FTMLDDLLDI AQGHSQKDYR NMEGTLSLAM KLLSKVFLQL LNDLAQLTTF CKLWLGVLSR MEKYMKVKVK GKRSEKLPEL VPELLKNTLL VMKTRGVLVQ
1401: RSALGGDSLW ELTWLHVNNI APTLQSEVFP DQGLDQPRDK KDETGRSLVS DEMGSVPSNE TVVSEGGRTG
Best Arabidopsis Sequence Match ( AT1G13980.1 )
(BLAST)
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.