Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G017750.4 | |
| HORVU4Hr1G002880.3 | |
| HORVU5Hr1G088970.4 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G361300.1 | Wheat | cytosol | 91.55 | 93.84 |
| TraesCS5D01G370200.1 | Wheat | cytosol | 93.3 | 89.42 |
| TraesCS5B01G363900.1 | Wheat | cytosol, plasma membrane | 93.46 | 86.85 |
| HORVU3Hr1G017750.4 | Barley | cytosol | 59.28 | 78.85 |
| EER91946 | Sorghum | plastid | 84.86 | 78.19 |
| Zm00001d047092_P001 | Maize | mitochondrion, plastid | 83.87 | 77.5 |
| Zm00001d029910_P001 | Maize | plastid | 83.94 | 77.35 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 57.61 | 65.37 |
| KRH31013 | Soybean | cytosol | 53.81 | 56.02 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 62.56 | 55.92 |
| AT1G13980.1 | Thale cress | cytosol | 61.72 | 55.89 |
| PGSC0003DMT400072858 | Potato | cytosol | 61.42 | 55.69 |
| Solyc05g013040.2.1 | Tomato | cytosol | 61.34 | 55.62 |
| CDX98140 | Canola | cytosol | 61.26 | 55.59 |
| Bra019694.1-P | Field mustard | cytosol | 61.19 | 55.52 |
| CDY36422 | Canola | cytosol | 61.11 | 55.42 |
| Solyc04g005560.2.1 | Tomato | nucleus | 60.81 | 55.37 |
| KRG97867 | Soybean | cytosol | 62.02 | 55.33 |
| HORVU4Hr1G002880.3 | Barley | cytosol | 58.68 | 54.22 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 32.95 | 52.8 |
| KRH15072 | Soybean | cytosol | 59.13 | 52.57 |
| KRH73064 | Soybean | cytosol | 58.45 | 52.17 |
| KRG97865 | Soybean | cytosol | 57.76 | 51.53 |
| KRH31014 | Soybean | nucleus | 57.08 | 50.92 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 37.21 | 35.28 |
| HORVU6Hr1G034130.6 | Barley | plastid | 20.55 | 16.01 |
| CDY69502 | Canola | cytosol | 3.2 | 15.85 |
| HORVU4Hr1G063180.1 | Barley | plastid | 21.54 | 15.83 |
| HORVU7Hr1G093440.3 | Barley | plastid | 19.79 | 15.43 |
| HORVU2Hr1G040020.14 | Barley | cytosol | 19.63 | 15.05 |
| HORVU1Hr1G028090.1 | Barley | endoplasmic reticulum | 0.15 | 3.7 |
| HORVU4Hr1G022040.1 | Barley | cytosol | 0.08 | 1.67 |
| HORVU1Hr1G033990.1 | Barley | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | UniProt:A0A287S6X0 | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0032012 | GO:GO:0065009 | EnsemblPlantsGene:HORVU5Hr1G088970 | EnsemblPlants:HORVU5Hr1G088970.4 |
| InterPro:IPR000904 | InterPro:IPR023394 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 |
| PANTHER:PTHR44190:SF3 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N |
| InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI000B46DCCD | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:+:583136360..583141229
Molecular Weight (calculated)
147001.0 Da
IEP (calculated)
5.963
GRAVY (calculated)
-0.149
Length
1314 amino acids
Sequence
(BLAST)
(BLAST)
0001: GGAAGPRPTR SSASAPSSTS CAPRRPARPS RAPRSPPCTS SSPSTSSRPA GAPPRPWAPS SRPSRAAASR SPTRPPRRSS SPGSCRTCFR VVQQAGTKGE
0101: LLQRVSRQTM QEVIRCVFVR LADIEPAAVV NEQIGKNQDL GAEELGNGKS DYVCLNSSGD EVGGGFGVVQ DKAMMEPLGV PCIVEILQFL CSLLNIAEDM
0201: DVSQRMNGID YDEDVPLFAL GLINSAIELS ASSIHRHPKL LAFVQDELFH NLMQFGLSMS PLILSTVCST VFTLFYHLRQ ELKLQIEAFF SCVILRLAQG
0301: RYGASYQQQE VALEALVDFC RQKEFMAEMY ANMDCDLQCS NVFEDLANLL SRSAFPVNSP LSALNVLALD GLVAVIQAIA ERSDHAHQHH EQTVPEISEY
0401: FPFWQLKCES SNDPDQWVRF VHQQKSIKRK LMVGVEHFNR DKKKGFEYLQ GVHLLPEKLD PRSVALFFRY TPGLDKNLLG EYLGNHDEFS ILVLHEFAKT
0501: FDFEDMNLDA ALRLFLETFR LPGESQKIQR ILEAFSERYY EQSPHMFVNR DAALVLSYSV IMLNTDQHNV RVKKKMTEED FIRNNRRING GNDLPREFLS
0601: ELFYSICRNE IKTIPEQGAG CSEMSYSRWV DLMWKSKRTS VYIACDSYPF FDNDMFPIMA GPSVAAISVV FDNVEHEEIL TGCIDGFLSV AKLAAFYHLD
0701: DVLNDLVVAL CKFTTLLNNS YADDPVIAFG VDTKARMATE AVFTIATSYG DHIRSGWRNI VDCILRLHKI GLLPGRLTGD TGDDQESSSD SLPSKLGSYA
0801: VAPQALPINT PKKTYGLMGR FSQLLYLDTE EPRSQPTEEQ LAAQRNALET VKKCQIGTIF TESKFLQADS LSNLARALIQ AAGRPQRITS SLDDEGTSVF
0901: CLELLITVTL NNRDRIVLLW QGVYEHITHI VQSTVMPCNL VEKAVFGLLH ICQRLLPYKE NLVDDLLRSL QLILKLDARV ADAYCENITL EVTRLVKANA
1001: THIKSQMGWR TIISLLCVTA RHPDASDAGF EALVFIMSEG AHLSPANFIV SVEASRQFAE SRLGSAERSI HALNLMADSV NCLTRWSREV KEAGGEADRI
1101: LEGIAEMWLR LVQALRKVCT DQREEVRNHA LLCLHRCLVV DGISVSSSAW LMSFDIIFQL LDELLEIAQS YSPKDFRNME VSLLHAVKLL CKVFLQSLKD
1201: LSAQSSFSKL WLEVLDMIEK FMKVKLRGRR TEKLHEAIPE LLKNILLVMK ANGVLSKTSA SEENTLWETT WLQVNKIAPS MQPEVFPDNE SDSAAKDEQS
1301: KSESPAQEGQ TVEQ
0101: LLQRVSRQTM QEVIRCVFVR LADIEPAAVV NEQIGKNQDL GAEELGNGKS DYVCLNSSGD EVGGGFGVVQ DKAMMEPLGV PCIVEILQFL CSLLNIAEDM
0201: DVSQRMNGID YDEDVPLFAL GLINSAIELS ASSIHRHPKL LAFVQDELFH NLMQFGLSMS PLILSTVCST VFTLFYHLRQ ELKLQIEAFF SCVILRLAQG
0301: RYGASYQQQE VALEALVDFC RQKEFMAEMY ANMDCDLQCS NVFEDLANLL SRSAFPVNSP LSALNVLALD GLVAVIQAIA ERSDHAHQHH EQTVPEISEY
0401: FPFWQLKCES SNDPDQWVRF VHQQKSIKRK LMVGVEHFNR DKKKGFEYLQ GVHLLPEKLD PRSVALFFRY TPGLDKNLLG EYLGNHDEFS ILVLHEFAKT
0501: FDFEDMNLDA ALRLFLETFR LPGESQKIQR ILEAFSERYY EQSPHMFVNR DAALVLSYSV IMLNTDQHNV RVKKKMTEED FIRNNRRING GNDLPREFLS
0601: ELFYSICRNE IKTIPEQGAG CSEMSYSRWV DLMWKSKRTS VYIACDSYPF FDNDMFPIMA GPSVAAISVV FDNVEHEEIL TGCIDGFLSV AKLAAFYHLD
0701: DVLNDLVVAL CKFTTLLNNS YADDPVIAFG VDTKARMATE AVFTIATSYG DHIRSGWRNI VDCILRLHKI GLLPGRLTGD TGDDQESSSD SLPSKLGSYA
0801: VAPQALPINT PKKTYGLMGR FSQLLYLDTE EPRSQPTEEQ LAAQRNALET VKKCQIGTIF TESKFLQADS LSNLARALIQ AAGRPQRITS SLDDEGTSVF
0901: CLELLITVTL NNRDRIVLLW QGVYEHITHI VQSTVMPCNL VEKAVFGLLH ICQRLLPYKE NLVDDLLRSL QLILKLDARV ADAYCENITL EVTRLVKANA
1001: THIKSQMGWR TIISLLCVTA RHPDASDAGF EALVFIMSEG AHLSPANFIV SVEASRQFAE SRLGSAERSI HALNLMADSV NCLTRWSREV KEAGGEADRI
1101: LEGIAEMWLR LVQALRKVCT DQREEVRNHA LLCLHRCLVV DGISVSSSAW LMSFDIIFQL LDELLEIAQS YSPKDFRNME VSLLHAVKLL CKVFLQSLKD
1201: LSAQSSFSKL WLEVLDMIEK FMKVKLRGRR TEKLHEAIPE LLKNILLVMK ANGVLSKTSA SEENTLWETT WLQVNKIAPS MQPEVFPDNE SDSAAKDEQS
1301: KSESPAQEGQ TVEQ
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.