Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G017750.4 | |
| HORVU4Hr1G002880.3 | |
| HORVU5Hr1G088970.4 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0326600-01 | Rice | cytosol, plasma membrane | 80.97 | 80.32 |
| TraesCS3B01G114200.1 | Wheat | plastid | 93.72 | 65.86 |
| TraesCS3A01G098600.1 | Wheat | cytosol, plastid | 92.41 | 65.83 |
| HORVU5Hr1G088970.4 | Barley | plastid | 78.85 | 59.28 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 58.5 | 49.91 |
| HORVU4Hr1G002880.3 | Barley | cytosol | 61.03 | 42.41 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 63.06 | 42.38 |
| PGSC0003DMT400072858 | Potato | cytosol | 61.34 | 41.82 |
| Solyc05g013040.2.1 | Tomato | cytosol | 61.23 | 41.75 |
| Solyc04g005560.2.1 | Tomato | nucleus | 60.63 | 41.51 |
| AT1G13980.1 | Thale cress | cytosol | 60.83 | 41.42 |
| KRG97867 | Soybean | cytosol | 61.64 | 41.34 |
| Bra019694.1-P | Field mustard | cytosol | 60.53 | 41.3 |
| CDX98140 | Canola | cytosol | 60.53 | 41.3 |
| CDY36422 | Canola | cytosol | 60.53 | 41.27 |
| KRH31013 | Soybean | cytosol | 51.42 | 40.25 |
| KRH15072 | Soybean | cytosol | 59.41 | 39.72 |
| KRH73064 | Soybean | cytosol | 58.6 | 39.33 |
| KRG97865 | Soybean | cytosol | 57.89 | 38.83 |
| KRH31014 | Soybean | nucleus | 57.59 | 38.63 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 26.01 | 31.34 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 36.03 | 25.69 |
| HORVU6Hr1G034130.6 | Barley | plastid | 22.57 | 13.23 |
| HORVU7Hr1G093440.3 | Barley | plastid | 22.47 | 13.18 |
| HORVU4Hr1G063180.1 | Barley | plastid | 23.58 | 13.03 |
| HORVU2Hr1G040020.14 | Barley | cytosol | 20.95 | 12.08 |
| HORVU1Hr1G028090.1 | Barley | endoplasmic reticulum | 0.1 | 1.85 |
| HORVU4Hr1G022040.1 | Barley | cytosol | 0.1 | 1.67 |
| HORVU1Hr1G033990.1 | Barley | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
| CDY69502 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005086 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0032012 | GO:GO:0065009 | EnsemblPlantsGene:HORVU3Hr1G017750 | EnsemblPlants:HORVU3Hr1G017750.4 | InterPro:IPR000904 | InterPro:IPR023394 |
| UniProt:M0VW36 | PFAM:PF01369 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF3 | SMART:SM00222 |
| SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI000294981D |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:45808145..45812634
Molecular Weight (calculated)
111074.0 Da
IEP (calculated)
5.391
GRAVY (calculated)
-0.041
Length
988 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEMYTNMDC DLQCSNVFED LVNVLSKSAF PEESTLSPLN VLALDGLVAV IQAIAERIGN SPQHCQQPVQ ELSEYFSFWQ LKCENINDPD QWVRFANQQK
101: SIKRKLMVGV EHFNMDKRKG FEYLQAAHLL PEKLDPQSVA LFFRYSPGLD KNLLGDYLGN HDEFSIQVLH EFSRTFDFKE LNLDAALRLF LETFRLPGES
201: QKIQRVLEAF SDRYYEESPE LFVNRDAALV LSYSVILLNT DQHNVRVKIK MSEEDFIRNN RHINGGNDLP REFLSELYYS ICRNEIKTIP EQGAGCSEMS
301: FSRWADLMFK SKRASAYIAC HSHPFLDHDM FLIMVRPTVA AISVIFDNIE QEEILTRCID GFLSVAKLAA FYHLNDVLND LVVALGKFTI LSIACDDPAT
401: AFGEDAKSRI ATEALFTIAA THGDHINRGW RTIVDCILRF HKIGLLPSCL TNSTAGDQES FSDSLPNKVS SSSPTVPQVQ PISIPKKTVG LMGRFTQLLY
501: LDAEEQRFQP TEEQLAAQRN ASETIKKCQI GTIFTESKFL QADSLLNLAR ALIQAAGQPQ KITSSIDVDS NAVICLELLV AVTLNNRDRI VLLWHDVYEH
601: ITHIVQSTVM PCELVEKAVF GLLDICQRLL PYKENLVDDL LRSLQLILKL DARVADAYCE SITQKVACLV KDNATHIKSQ MGWQTIISLI CVTAHHPDAS
701: DAGFEALVYI MFEGAHISPA NFVLFMEASR QFAESRLGSA ERSIHALNLM AESVNCLAHW SHEVKEAGGD AERMLEGITE MWLRLVQALR KVCTDQREEV
801: RDHALVLLHR CIVVDGMSVP SSAWLMSFDI VFQLLDELLE IAQNFSPKHF RNMEASLLHA VKLLSKLSLQ SLNDLSAHSG FSKLWVEVLD MAEKLMKAKV
901: RGGSRTERLQ ETATELLKNM LLVMKASGVL SRTSAGGESS LWEATWLHVN KMAPSLQSVV FPDYDDAVQG AQSKLDIPAV SEGRLVPV
101: SIKRKLMVGV EHFNMDKRKG FEYLQAAHLL PEKLDPQSVA LFFRYSPGLD KNLLGDYLGN HDEFSIQVLH EFSRTFDFKE LNLDAALRLF LETFRLPGES
201: QKIQRVLEAF SDRYYEESPE LFVNRDAALV LSYSVILLNT DQHNVRVKIK MSEEDFIRNN RHINGGNDLP REFLSELYYS ICRNEIKTIP EQGAGCSEMS
301: FSRWADLMFK SKRASAYIAC HSHPFLDHDM FLIMVRPTVA AISVIFDNIE QEEILTRCID GFLSVAKLAA FYHLNDVLND LVVALGKFTI LSIACDDPAT
401: AFGEDAKSRI ATEALFTIAA THGDHINRGW RTIVDCILRF HKIGLLPSCL TNSTAGDQES FSDSLPNKVS SSSPTVPQVQ PISIPKKTVG LMGRFTQLLY
501: LDAEEQRFQP TEEQLAAQRN ASETIKKCQI GTIFTESKFL QADSLLNLAR ALIQAAGQPQ KITSSIDVDS NAVICLELLV AVTLNNRDRI VLLWHDVYEH
601: ITHIVQSTVM PCELVEKAVF GLLDICQRLL PYKENLVDDL LRSLQLILKL DARVADAYCE SITQKVACLV KDNATHIKSQ MGWQTIISLI CVTAHHPDAS
701: DAGFEALVYI MFEGAHISPA NFVLFMEASR QFAESRLGSA ERSIHALNLM AESVNCLAHW SHEVKEAGGD AERMLEGITE MWLRLVQALR KVCTDQREEV
801: RDHALVLLHR CIVVDGMSVP SSAWLMSFDI VFQLLDELLE IAQNFSPKHF RNMEASLLHA VKLLSKLSLQ SLNDLSAHSG FSKLWVEVLD MAEKLMKAKV
901: RGGSRTERLQ ETATELLKNM LLVMKASGVL SRTSAGGESS LWEATWLHVN KMAPSLQSVV FPDYDDAVQG AQSKLDIPAV SEGRLVPV
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.