Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G017750.4 | |
| HORVU4Hr1G002880.3 | |
| HORVU5Hr1G088970.4 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0666100-00 | Rice | extracellular, golgi | 75.67 | 88.85 |
| TraesCS4D01G016900.1 | Wheat | cytosol | 84.95 | 85.43 |
| TraesCS4B01G018700.1 | Wheat | cytosol | 84.53 | 84.95 |
| TraesCS4A01G294900.1 | Wheat | cytosol | 84.25 | 84.6 |
| KXG37878 | Sorghum | cytosol | 77.5 | 78.1 |
| Zm00001d013590_P001 | Maize | mitochondrion | 76.65 | 77.03 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 58.72 | 72.11 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 64.63 | 62.52 |
| KRH31013 | Soybean | cytosol | 55.2 | 62.2 |
| Solyc04g005560.2.1 | Tomato | nucleus | 62.87 | 61.95 |
| KRG97867 | Soybean | cytosol | 64.14 | 61.91 |
| PGSC0003DMT400072858 | Potato | cytosol | 63.01 | 61.84 |
| AT1G13980.1 | Thale cress | cytosol | 62.94 | 61.68 |
| Solyc05g013040.2.1 | Tomato | cytosol | 62.59 | 61.42 |
| Bra019694.1-P | Field mustard | cytosol | 62.52 | 61.4 |
| CDX98140 | Canola | cytosol | 62.52 | 61.4 |
| CDY36422 | Canola | cytosol | 62.45 | 61.28 |
| HORVU3Hr1G017750.4 | Barley | cytosol | 42.41 | 61.03 |
| HORVU5Hr1G088970.4 | Barley | plastid | 54.22 | 58.68 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 33.05 | 57.32 |
| KRH73064 | Soybean | cytosol | 58.58 | 56.59 |
| KRH15072 | Soybean | cytosol | 58.3 | 56.09 |
| KRG97865 | Soybean | cytosol | 56.54 | 54.58 |
| KRH31014 | Soybean | nucleus | 56.47 | 54.51 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 35.79 | 36.72 |
| HORVU6Hr1G034130.6 | Barley | plastid | 19.76 | 16.67 |
| HORVU4Hr1G063180.1 | Barley | plastid | 20.53 | 16.33 |
| HORVU7Hr1G093440.3 | Barley | plastid | 19.13 | 16.14 |
| HORVU2Hr1G040020.14 | Barley | cytosol | 18.35 | 15.23 |
| CDY69502 | Canola | cytosol | 2.67 | 14.34 |
| HORVU1Hr1G028090.1 | Barley | endoplasmic reticulum | 0.14 | 3.7 |
| HORVU4Hr1G022040.1 | Barley | cytosol | 0.14 | 3.33 |
| HORVU1Hr1G033990.1 | Barley | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | UniProt:A0A287MXW2 | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0032012 | GO:GO:0065009 | EnsemblPlantsGene:HORVU4Hr1G002880 | EnsemblPlants:HORVU4Hr1G002880.3 | InterPro:IPR000904 |
| InterPro:IPR023394 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF3 |
| SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom |
| InterPro:Sec7_dom_sf | UniParc:UPI000B486291 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:5429867..5435527
Molecular Weight (calculated)
138546.0 Da
IEP (calculated)
6.193
GRAVY (calculated)
-0.098
Length
1422 amino acids
Sequence
(BLAST)
(BLAST)
0001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPAAPAL GDQHVLTAVN
0201: TCFRVVHQAA AKGDLLQRFS RHAMHELVRL VFARLPHIGA GDAHDAAVKP EMGGMDKNHP FGGGQMENGN GSYVSEAGTP DENSPDGSVL VVEPYGIPCM
0301: EEIFHFLCSL LNGVELNGYD EGQPLFALKL INSAIELGGS AIGRHPKLLS LVQDELFRNL MQLGLSISPL TLSVVCSIVL NLYHHLRNEL KMQLEAFFCC
0401: IILRLAQPRF GATYHQQEVA MEALVDFCRQ KNFMVEMYAN LDCDITCRNV FEELANLLSK SAFPINCPLS SMHILALEGL IAVIQGMADR IGNETSGPEL
0501: RSVELDEYAP FWTVKCENFS DPQHWVKFVR QRKYVKRRLM IGADHFNRDP KKGLEFLQGN HLLPEKLDPQ SVACFFRYTA GLDKNLVGDF LGNHDEFCVQ
0601: VLHEFAQTFD FQEMNLDTAL RLFLETFRLP GESQKIQRVL EAFSDRYYEQ APQAFANKDT ALLLSYSIIM LNTDQHNMQV KKKMTEEDFI KNNRNINGGS
0701: DLPREMLSEL YHAICRNEIK TTPEQSMGYL EMSPSRWIDL MRKSKSTPQY IVGDSQPFLD HDMFAIMSGP TIAAIAVVFD HSEHEEVLLT CVDGFLGIAK
0801: ISAFHHLEDV LDDLVVSLCK FTTLLNTSLV EEPVTAFGDD LKARLATETL FIIANKYGHY IRTGWRNVLD CILRLHKLGL LPARVASDAA DDSEVSAETV
0901: QGKPVPSSIS TSHIPVMGTP RKSSGLMGRF SQLLSLDSEE PRSQPTEQQL AAHQRTLQTI QKCRIDSIFT ESKVLQPDSL LQLARALIWA AGRPQKVASS
1001: PDDEDTAVFC LELLIAITLN NRDRIVLLWQ GVYEHIANIV QSTVMPCALV EKAIFGLLRI CQRLLPYKEN LADDLLRSLQ LVLKLDARVA DAYCENITQE
1101: VARLVKANAG HIKSQMGWRT VVLLLSITAR HPDASGVGFE AIMFIMSEGH LSKSNYAFCI EASRQFAESR VGLTDRSIRA LDLMADSVTN LARWSQDTKE
1201: PGEEADRGME AIREMWLKLL QALKKLSLDQ REEVRNHALV SLQRCLTATE GICLQPTTWS HAFDHIIFAL LDDLLEIAQN HSQKDHRNME GSLVLAVKLV
1301: AKAYLQLLPD LFGPPPPLCK LWLGVLSRME KCIKTKVRGK RSDKLQELIP DLLRNILVAM KGRGILAKRS TIGGDSLWEL TWLHVNNIST GLQSEVFPTQ
1401: EYEPPSNAGS PRGGLNDVEA KN
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPAAPAL GDQHVLTAVN
0201: TCFRVVHQAA AKGDLLQRFS RHAMHELVRL VFARLPHIGA GDAHDAAVKP EMGGMDKNHP FGGGQMENGN GSYVSEAGTP DENSPDGSVL VVEPYGIPCM
0301: EEIFHFLCSL LNGVELNGYD EGQPLFALKL INSAIELGGS AIGRHPKLLS LVQDELFRNL MQLGLSISPL TLSVVCSIVL NLYHHLRNEL KMQLEAFFCC
0401: IILRLAQPRF GATYHQQEVA MEALVDFCRQ KNFMVEMYAN LDCDITCRNV FEELANLLSK SAFPINCPLS SMHILALEGL IAVIQGMADR IGNETSGPEL
0501: RSVELDEYAP FWTVKCENFS DPQHWVKFVR QRKYVKRRLM IGADHFNRDP KKGLEFLQGN HLLPEKLDPQ SVACFFRYTA GLDKNLVGDF LGNHDEFCVQ
0601: VLHEFAQTFD FQEMNLDTAL RLFLETFRLP GESQKIQRVL EAFSDRYYEQ APQAFANKDT ALLLSYSIIM LNTDQHNMQV KKKMTEEDFI KNNRNINGGS
0701: DLPREMLSEL YHAICRNEIK TTPEQSMGYL EMSPSRWIDL MRKSKSTPQY IVGDSQPFLD HDMFAIMSGP TIAAIAVVFD HSEHEEVLLT CVDGFLGIAK
0801: ISAFHHLEDV LDDLVVSLCK FTTLLNTSLV EEPVTAFGDD LKARLATETL FIIANKYGHY IRTGWRNVLD CILRLHKLGL LPARVASDAA DDSEVSAETV
0901: QGKPVPSSIS TSHIPVMGTP RKSSGLMGRF SQLLSLDSEE PRSQPTEQQL AAHQRTLQTI QKCRIDSIFT ESKVLQPDSL LQLARALIWA AGRPQKVASS
1001: PDDEDTAVFC LELLIAITLN NRDRIVLLWQ GVYEHIANIV QSTVMPCALV EKAIFGLLRI CQRLLPYKEN LADDLLRSLQ LVLKLDARVA DAYCENITQE
1101: VARLVKANAG HIKSQMGWRT VVLLLSITAR HPDASGVGFE AIMFIMSEGH LSKSNYAFCI EASRQFAESR VGLTDRSIRA LDLMADSVTN LARWSQDTKE
1201: PGEEADRGME AIREMWLKLL QALKKLSLDQ REEVRNHALV SLQRCLTATE GICLQPTTWS HAFDHIIFAL LDDLLEIAQN HSQKDHRNME GSLVLAVKLV
1301: AKAYLQLLPD LFGPPPPLCK LWLGVLSRME KCIKTKVRGK RSDKLQELIP DLLRNILVAM KGRGILAKRS TIGGDSLWEL TWLHVNNIST GLQSEVFPTQ
1401: EYEPPSNAGS PRGGLNDVEA KN
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.