Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013590_P001 | Maize | mitochondrion | 96.1 | 95.83 |
| Os03t0666100-00 | Rice | extracellular, golgi | 78.45 | 91.41 |
| TraesCS4D01G016900.1 | Wheat | cytosol | 88.45 | 88.26 |
| TraesCS4A01G294900.1 | Wheat | cytosol | 88.16 | 87.85 |
| TraesCS4B01G018700.1 | Wheat | cytosol | 87.88 | 87.63 |
| HORVU4Hr1G002880.3 | Barley | cytosol | 78.1 | 77.5 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 60.6 | 73.83 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 71.93 | 69.05 |
| KRH31013 | Soybean | cytosol | 61.45 | 68.7 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 39.76 | 68.41 |
| KRG97867 | Soybean | cytosol | 71.16 | 68.16 |
| AT1G13980.1 | Thale cress | cytosol | 69.81 | 67.88 |
| Solyc04g005560.2.1 | Tomato | nucleus | 69.31 | 67.78 |
| PGSC0003DMT400072858 | Potato | cytosol | 69.38 | 67.56 |
| Bra019694.1-P | Field mustard | cytosol | 69.24 | 67.47 |
| CDX98140 | Canola | cytosol | 69.24 | 67.47 |
| CDY36422 | Canola | cytosol | 69.17 | 67.36 |
| Solyc05g013040.2.1 | Tomato | cytosol | 69.17 | 67.36 |
| KRH73064 | Soybean | cytosol | 65.84 | 63.11 |
| KRH15072 | Soybean | cytosol | 65.77 | 62.79 |
| EER91946 | Sorghum | plastid | 62.79 | 62.13 |
| KRG97865 | Soybean | cytosol | 63.64 | 60.96 |
| KRH31014 | Soybean | nucleus | 63.08 | 60.42 |
| CDY69502 | Canola | cytosol | 7.73 | 41.13 |
| EES17039 | Sorghum | cytosol | 39.33 | 39.31 |
| OQU76719 | Sorghum | plastid | 21.26 | 18.03 |
| KXG29692 | Sorghum | plastid | 21.62 | 17.99 |
| EER92558 | Sorghum | cytosol | 22.25 | 17.5 |
| KXG36486 | Sorghum | cytosol | 19.28 | 15.95 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | UniProt:A0A1B6QIX8 | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0032012 | GO:GO:0065009 | InterPro:IPR000904 | InterPro:IPR023394 | EnsemblPlants:KXG37878 |
| ProteinID:KXG37878 | ProteinID:KXG37878.1 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 |
| PANTHER:PTHR44190:SF3 | SMART:SM00222 | EnsemblPlantsGene:SORBI_3001G143600 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf |
| InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI00081ADE07 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:11513757..11520615
Molecular Weight (calculated)
156228.0 Da
IEP (calculated)
6.114
GRAVY (calculated)
-0.007
Length
1411 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRPRMLGGG AGGIDPIAEE PHHHARSPAD GGLGLGPDPA ALACAISAEA SAVLAVMRRG LRHPRADDAA AEHPLVASLR ALRRLAFSPS PALPAAALRP
0101: FLDAVRSEDA GAAVTSASLA ALHEVMSLTG AALPGAALRE VVDAVASCRF EAGAEPAAEE AVLMRMLQAL LACLRAPAAP ALGDQHVCTA VNTCFRVVHQ
0201: ASAKSELLQR FSRHAMHELI RCVFARLPQI GSADGVDAAV KPEMGGMDVN HPFGIRQMEN GNGSYVSETG ASDENSADGS GLIVEPYGVP CMVEIFHFLC
0301: SLLNVVEHIG LDEDLPLFAL KLINSAIELG GSSIQKHPKL LSLVQDELFR NLMQFGLSMN PLILSIVCSI ALNLYHHLRT ELKLQLEAFF SCIIIRLAQP
0401: RFGATYHQQE VAMEALVDFC RQKNFMVEMY ANLDCDITCR NVFEELANLL SKSAFPINCP LSSMHILALE GLIAVIQGMA DRIGNATSRP ELLPVELDEY
0501: TPFWTVKCEN FSDPRHWVKF VRQRKYVKRR LMIGADHFNR DPKKGLEFLQ GTHLLPEKLD PQSVACFFRY TAGLDKNLVG DFLGNHDEFC VQVLHEFAQT
0601: FDFHEMNLDT ALRLFLETFR LPGESQKIQR VLEAFSDRYY EQSPQSFANK DTALLLSYSI IMLNTDQHNM QVKKKMTEED FIKNNRNING GSDLPREMLS
0701: ELYHSICRNE IKTTPEQGLG YFEMSPSRWI DLMRKSKSTS PYIVGDSQPF LDHDMFAVMS GPTIAAIAVV FDHSEHEEVL LTCVDGFLGV AKISAFHHLE
0801: DVLDDLVVSL CKFTTLLNTS LVEEPVTAFG DDLKARLATE TLFTIANRYG DYIRTGWRNV LDCILRLHKL GLLPARVASD AADDSELSAE AVQGKAAPSA
0901: VPPSHIPVMG TPRKSSGLMG RFSQLLSLDS EEPRSQPTEQ QLAAHQRTLQ TIQKCRIDSI FTESKFLQPD SLLQLARALI WAAGRPQKVA SSPDDEDTAV
1001: FCLELLIAIT LNNRDRIVLL WQGVYEHIAN IVQSTVMPCA LVEKAIFGLL RICKSLLPYK ENLADELLRS LQLVLKLDAR VADAYCENIT QEVARLVKAN
1101: AAHIKSQMGW RTVILLLSIT ARHPDASEVG FEAIVFIMTE GAHLSLANYG FCIEASRQFA ESRVGLADRS VRALDLMSDS VRSLAMWSQE IKATCEEGEK
1201: GLEAIREMWL KLLQALKKLS LDQREEVRNH ALASLQRCLT ATEEICLQSA TWSHAFDLVI FSLLDDLLEI SQNHSQKDYR NMEGSLVLAM KLVAKVYLQL
1301: LPDLFGLSSF CKLWLGVLSR MEKYIKIKVR GKRSDKLQEV IPDLLKNILL VMKNKGILAK RSTIGGDSLW ELTWLHANNI STSLLPDVFP SQEYEQQSSA
1401: GSPRGPSSVE A
0101: FLDAVRSEDA GAAVTSASLA ALHEVMSLTG AALPGAALRE VVDAVASCRF EAGAEPAAEE AVLMRMLQAL LACLRAPAAP ALGDQHVCTA VNTCFRVVHQ
0201: ASAKSELLQR FSRHAMHELI RCVFARLPQI GSADGVDAAV KPEMGGMDVN HPFGIRQMEN GNGSYVSETG ASDENSADGS GLIVEPYGVP CMVEIFHFLC
0301: SLLNVVEHIG LDEDLPLFAL KLINSAIELG GSSIQKHPKL LSLVQDELFR NLMQFGLSMN PLILSIVCSI ALNLYHHLRT ELKLQLEAFF SCIIIRLAQP
0401: RFGATYHQQE VAMEALVDFC RQKNFMVEMY ANLDCDITCR NVFEELANLL SKSAFPINCP LSSMHILALE GLIAVIQGMA DRIGNATSRP ELLPVELDEY
0501: TPFWTVKCEN FSDPRHWVKF VRQRKYVKRR LMIGADHFNR DPKKGLEFLQ GTHLLPEKLD PQSVACFFRY TAGLDKNLVG DFLGNHDEFC VQVLHEFAQT
0601: FDFHEMNLDT ALRLFLETFR LPGESQKIQR VLEAFSDRYY EQSPQSFANK DTALLLSYSI IMLNTDQHNM QVKKKMTEED FIKNNRNING GSDLPREMLS
0701: ELYHSICRNE IKTTPEQGLG YFEMSPSRWI DLMRKSKSTS PYIVGDSQPF LDHDMFAVMS GPTIAAIAVV FDHSEHEEVL LTCVDGFLGV AKISAFHHLE
0801: DVLDDLVVSL CKFTTLLNTS LVEEPVTAFG DDLKARLATE TLFTIANRYG DYIRTGWRNV LDCILRLHKL GLLPARVASD AADDSELSAE AVQGKAAPSA
0901: VPPSHIPVMG TPRKSSGLMG RFSQLLSLDS EEPRSQPTEQ QLAAHQRTLQ TIQKCRIDSI FTESKFLQPD SLLQLARALI WAAGRPQKVA SSPDDEDTAV
1001: FCLELLIAIT LNNRDRIVLL WQGVYEHIAN IVQSTVMPCA LVEKAIFGLL RICKSLLPYK ENLADELLRS LQLVLKLDAR VADAYCENIT QEVARLVKAN
1101: AAHIKSQMGW RTVILLLSIT ARHPDASEVG FEAIVFIMTE GAHLSLANYG FCIEASRQFA ESRVGLADRS VRALDLMSDS VRSLAMWSQE IKATCEEGEK
1201: GLEAIREMWL KLLQALKKLS LDQREEVRNH ALASLQRCLT ATEEICLQSA TWSHAFDLVI FSLLDDLLEI SQNHSQKDYR NMEGSLVLAM KLVAKVYLQL
1301: LPDLFGLSSF CKLWLGVLSR MEKYIKIKVR GKRSDKLQEV IPDLLKNILL VMKNKGILAK RSTIGGDSLW ELTWLHANNI STSLLPDVFP SQEYEQQSSA
1401: GSPRGPSSVE A
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.