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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028438_P002 Maize plastid 98.22 98.16
Os03t0246800-02 Rice plasma membrane 36.62 92.28
TraesCS4D01G225300.1 Wheat golgi, unclear 91.14 91.44
HORVU4Hr1G063180.1 Barley plastid 91.08 91.39
TraesCS4A01G067400.1 Wheat plastid 91.03 91.33
TraesCS4B01G224700.1 Wheat plastid 89.58 89.88
KRH00582 Soybean extracellular, golgi 10.7 80.33
GSMUA_Achr5P18830_001 Banana cytosol 75.2 78.8
GSMUA_Achr8P19420_001 Banana cytosol 74.75 76.98
VIT_15s0048g00800.t01 Wine grape cytosol 73.36 73.97
Solyc01g091460.2.1 Tomato extracellular 71.74 72.38
PGSC0003DMT400033251 Potato cytosol 71.74 72.38
KRH00580 Soybean cytosol 71.52 71.96
KRH40586 Soybean cytosol 71.52 71.92
KRH65253 Soybean cytosol 70.74 71.21
KRH76287 Soybean cytosol 71.29 70.74
CDX89082 Canola cytosol 68.56 69.53
Bra014466.1-P Field mustard cytosol 68.51 69.47
CDY51011 Canola cytosol 68.23 69.19
AT3G60860.1 Thale cress cytosol 68.67 68.71
Bra032659.1-P Field mustard cytosol, plastid 65.61 67.18
AT1G01960.1 Thale cress cytosol 65.44 67.09
CDY38039 Canola cytosol 65.55 67.08
KRH00583 Soybean endoplasmic reticulum, vacuole 5.3 64.63
KXG29692 Sorghum plastid 46.49 49.2
OQU76719 Sorghum plastid 44.43 47.9
KXG36486 Sorghum cytosol 33.56 35.31
EER91946 Sorghum plastid 17.95 22.58
KXG37878 Sorghum cytosol 17.5 22.25
EES17039 Sorghum cytosol 15.94 20.25
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20MapMan:22.3.3.2EntrezGene:8054344InterPro:ARM-type_foldUniProt:C5WQY7
InterPro:DCB_domEnsemblPlants:EER92558ProteinID:EER92558ProteinID:EER92558.1GO:GO:0003674GO:GO:0005086
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0032012
GO:GO:0065009InterPro:IPR000904InterPro:IPR023394InterPro:Mon2_CPFAM:PF01369PFAM:PF09324
PFAM:PF12783PFAM:PF16206PFAM:PF16213PFscan:PS50190PANTHER:PTHR10663PANTHER:PTHR10663:SF108
SMART:SM00222EnsemblPlantsGene:SORBI_3001G437400SUPFAM:SSF48371SUPFAM:SSF48425unigene:Sbi.4075InterPro:Sec7_C
InterPro:Sec7_C_sfInterPro:Sec7_NInterPro:Sec7_domInterPro:Sec7_dom_sfUniParc:UPI0001A8271CRefSeq:XP_002465560.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:71574233..71583156
Molecular Weight (calculated)
197548.0 Da
IEP (calculated)
5.205
GRAVY (calculated)
-0.079
Length
1794 amino acids
Sequence
(BLAST)
0001: MASAVAAPPP SPPESDPRLV EVFTPFLEKL IKNASWRNKA HSKLSHTAKS ILDRLQKPPP PPAAEAQAPS TPTSAPSTPT SSSAQPGPLR SLSLADSELL
0101: LAPVTSALGS GSAKLAEAAL ELLHRLIAHS YIHGEADPSA DPSAQLVASL LDAACNALGL DDEHIELLLL KTLLSAVTST SVRLHGDCLL RAVRACYDMY
0201: LGSRSAVNQA TAKASLVQML VIVFRRMEAD SSTVPVQPIV VADVIELPEA GPGSPTADPN AVQGFISKII GDFDGALTPL ARTTSSAGAG ATVAHDGAFE
0301: TTAAAEEGAN PADLLDSTDK DMLDAKYWEI SMYKTAIEGR KDELGVEGAV VGTLDDDADV RIGNKLRRDA FLVFRALCKL SMKTPPKDAP ADPIVMRGKI
0401: LALELLKILL ENAGAVFRTS ERFLGAIKQY LCLSLLKNCA SSHMIVFQLS CSIFISLVAR FRPGLKAEIG VFFPMIILRV LENIAQPNYQ AKMIVLRFLE
0501: KLCGDSQILV DIFLNYDCDV HSSNIFERMV NGLLKTAQGP PAGVPTTLVP PQDTTMKSEA MKCLVAILRS MGDWMNKQLR IPDPASPNVE SEKNDNDGGN
0601: ELPQADNNGD ESSEASDSHS ELSNGISEAA SLEQRRAYKI ELQEGISLFN RKPKKGIEFL VNASKVGESP EEIAAFLKSA SGLNKTMIGD YLGEREDLSL
0701: KVMHAYVDSF DFQGLEFDEA IRAFLQGFRL PGEAQKIDRI MEKFAERYCK CNPKAFSSAD TAYVLAYSVI MLNTDAHNPM VKNKMSPEDF IRNNRGIDDG
0801: KDLPEEFMRS LYERIWKKEI KMKEDEFVPQ QQQSTSSNKI LGLDNILNIV VRKRGSSMET SDDLIKHMQE QFKEKARMSE SIFYPATDVV VLKFMVEVCW
0901: APMLAAFSVP LDQSDDEIVV SQCLEGFRSA IHVTAAMSMK TQRDAFITSL AKFTSLHSAA DIKQKNVEAI KAILLIADED GNYLQEAWEH ILTCVSRFEN
1001: LHLVGEGAPP DATFFALQQP DLDKSKQAKS SILPVLKKKA PNATSASKRG SYDSAGVGGK ASGVDQMNNE VTSLLEQVGM AEMNRVFVRS QKLNSEGIID
1101: FVKALCKVSM EELRSASDPR VFSLTKIVEI AHYNMNRIRL VWSSIWHVLS DFFVTIGCSE NLSIAIFAMD SLRQLSMKFL EREELANYNF QNEFMKPFVV
1201: VMRKSRAVEI RELIIRCVSQ MVLARVSHVK SGWKSMFMVF ATASYDDHKN IVLLAFEIIE KILREYFPYI TETESTTFND CVNCLIAFTN SRFNKDISLN
1301: AIGFLRFCAA KLAEGDIGSS RLKDNPSNSN PPSPHLTNDG KQEGTVLVDK EDHIHFWFPL LAGLSELTFD LRPEIRKSAL QVLFDTLRNH GHLFSLPLWE
1401: KVFDSVLFPI FDYVRHAIDP SGSSPQGQNV GNDPAELDQD AWLYETCTLA LQLVVDLFVK FYDTVNPLLK KVLLLLTSFI KRPHQSLAGI GIAAFVRLMS
1501: SAGSMFVDEK WLEVVLSLKE AATETLPDFT YVSSGAYLEN APTENGVSAD NREDESQPLA DDNEESSRSR NLYFAIGDAK CRAAVQLLLI QAVMEVYNMY
1601: RAQLSAQNTV ILFEALHTVA AHAHKINSDS DLRSKLQELG SMTQMQDPPL LRLENESYQL CLSILQNIFL DISPDHGSTE VVESHLIGLC KEVLEVYLST
1701: AKPSQLSSGT QPLGHWLIPV GSSKRRELAA RAPLVVSTLQ AISGLGDSAF EKNLGQFFPL LSGLISCEHG SSEVQVALSD MFSTWVGPLV LQSC
Best Arabidopsis Sequence Match ( AT3G60860.1 )
(BLAST)
0001: MASSEADSRL SRVVTPALEK IVKNASWRKH SKLANECKAV IERLNSLQKS PPPSSSAATD SESESSVPGP LNDGGSIEYS LADSELIFSP LINACGTGLA
0101: KIIEPAIDCI QKLIAHGYIR GESDPSGGAE SLLLFKLIDS VCKCHDLGDE SIELPVLKTL LSAINSISLR IHGKCLLLVV RTCYDIYLGS KNVVNQTTAK
0201: ASLIQILVIV FRRMEADSST VPIQPIVVAE LMEPLEKSDA DGTMTQFVQG FITKIMQDID GVLNPTMSGS GSGSGSGGQD GAYGTTTVET TNPTDLLDST
0301: DKDMLDAKYW EISMYKSALE GRKGELTDGD AERDDDLEVQ IENKLRRDAC LVFRALCKLS MKAPPKESSA DPQSMRGKIL ALELLKILLE NAGAVFRTSE
0401: KFSADIKQFL CLSLLKNSAS TLMIIFQLSC SIFISLVARF RAGLKAEIGV FFPMIVLRVV ENVAQPNFQQ KMIVLRFLDK LCLDSQILVD IFLNYDCDVN
0501: SSNIFERMVN GLLKTAQGVP PGTATTLMPP QEAAMKLEAM KCLVAILKSM GDWLNKQLRL PVSNSLNKSD VIEIDLGPGS PQLANGNADE SADGSDTYSE
0601: SSGGTSDALA IEQRRAYKLE LQEGISLFNR KPTKGIEFLI NAGKVGESPE EIAGFLKDAS GLNKTLIGDY LGEREDLALK VMHAYVDSFD FRGMEFDEAI
0701: RTFLEGFRLP GEAQKIDRIM EKFAERYCKC NPKVFTSADS AYVLAYSVIM LNTDAHNPMV KNKMSADDFI RNNRGIDDGK DLPADYMRSL YERITKHEIK
0801: MKEDDLRLQQ KQYANSNRML GLDGILNIVI RKQWGDSYAE TSDDLMKHMQ EQFKEKARKS ESTYYAATDV VILRFMIEAC WAPMLAAFSV PLDQSDDLIV
0901: INICLEGFHH AIHATSLMSM KTHRDAFVTS LAKFTSLHSP ADIKQRNIEA IKAILRLADE EGNYLQDAWE HILTCVSRFE QLHLLGEGAP PDATFFASKQ
1001: NESEKSKQPK QYILPVLKRK GPGKSQYAAT GVLRGSYDSM SLGGKGSKNV RQEQMSSIVS NLNLLEQVGE MNQVFSQSQK LNSEAIIDFV KALCKVSMDE
1101: LRSPSNPRVF SLTKIVEIAH YNMNRIRLVW SSIWQVLSGF FVTIGCSENL SIAIFAMDSL RQLSMKFLER EELANYNFQN EFMTPFVIVM RRSNDVEIRE
1201: LIIRCVSQMV LSRVNNVKSG WKSMFMVFTT AAYDDHKNIV FLSFEIIEKI IREYFPYITE TETTTFTDCV NCLVAFTNNR FSKDISLSSI AFLRYCATKL
1301: AEGDLNSPST NKYKGTSGKI PQSSLHSGKS GKQENGEIVN NNHLYFWFPL LSGLSELSFD PRPEIRKSAL QIMFDTLRNH GHLFSLPLWE KVFESVLFPI
1401: FDYVRHSIDP SGEDESADQG SSGGEVDELD HDAWLYETCT LALQLVVDLF VKFYTTVNPL LEKVLMLLVS FIKRPHQSLA GIGIAAFVRL MSDADGLFSE
1501: EKWLEVVSAL KEAAKTTCPD FSYFLSEEYV ARSQRSALNI QNSNAESAAP TATDGNEESQ RTATHLYAAI SDAKCRAAVQ LLLIQAVMEI YNMYRPQLSA
1601: KNTLVLVDAL HGVALHAHGI NSNTILRSRL QELGPMTQMQ DPPLLRLENE SYQICLTFLQ NLVADKTKKE EEEEEEEIES LLVNICQEVL NFYIETSSSA
1701: KKLQSESSRA SEYRWRIPLG SGKRRELSAR APLIVATLQA MCTLDEASFE KNLKCLFPLL ANLISCEHGS NEVQTALADM LGLSVGPVLL QWC
Arabidopsis Description
BIG2Brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZX8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.