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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG97867
KRG98290
KRH30309

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G13980.1 KRG97867 AT1G13980.1 10715321
AT1G13980.1 KRG97867 AT1G13980.1 18203920
AT1G13980.1 KRG98290 AT2G29960.1 10715321
AT1G13980.1 KRH30309 AT2G29960.1 10715321
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH31013 Soybean cytosol 84.11 98.18
AT1G13980.1 Thale cress cytosol 81.26 82.49
PGSC0003DMT400072858 Potato cytosol 80.65 81.99
CDX98140 Canola cytosol 80.18 81.56
Bra019694.1-P Field mustard cytosol 80.11 81.49
Solyc05g013040.2.1 Tomato cytosol 80.11 81.44
CDY36422 Canola cytosol 80.04 81.37
Solyc04g005560.2.1 Tomato nucleus 79.57 81.22
KRH73064 Soybean cytosol 79.23 79.28
KRH15072 Soybean cytosol 79.5 79.23
KRG97865 Soybean cytosol 77.94 77.94
KRH31014 Soybean nucleus 77.12 77.12
Os03t0666100-00 Rice extracellular, golgi 62.39 75.89
GSMUA_Achr6P22810_001 Banana golgi 59.33 75.47
GSMUA_Achr6P03140_001 Banana cytosol, nucleus, plastid 41.41 74.39
CDY69502 Canola cytosol 13.17 73.21
KXG37878 Sorghum cytosol 68.16 71.16
Zm00001d013590_P001 Maize mitochondrion 68.16 70.95
TraesCS4D01G016900.1 Wheat cytosol 66.67 69.45
TraesCS4B01G018700.1 Wheat cytosol 66.53 69.26
TraesCS4A01G294900.1 Wheat cytosol 66.53 69.21
Os02t0326600-01 Rice cytosol, plasma membrane 44.33 65.56
TraesCS5A01G361300.1 Wheat cytosol 56.55 64.98
HORVU4Hr1G002880.3 Barley cytosol 61.91 64.14
TraesCS5D01G370200.1 Wheat cytosol 59.13 63.53
TraesCS5B01G363900.1 Wheat cytosol, plasma membrane 60.56 63.08
EER91946 Sorghum plastid 60.76 62.76
Zm00001d047092_P001 Maize mitochondrion, plastid 60.29 62.45
Zm00001d029910_P001 Maize plastid 60.15 62.13
HORVU5Hr1G088970.4 Barley plastid 55.33 62.02
HORVU3Hr1G017750.4 Barley cytosol 41.34 61.64
TraesCS3A01G098600.1 Wheat cytosol, plastid 57.03 60.56
TraesCS3B01G114200.1 Wheat plastid 57.09 59.82
KRH39264 Soybean cytosol 38.29 41.08
KRH48417 Soybean cytosol 24.03 36.53
KRH00582 Soybean extracellular, golgi 5.63 34.73
KRH00583 Soybean endoplasmic reticulum, vacuole 1.97 19.73
KRH00580 Soybean cytosol 22.74 18.79
KRH65253 Soybean cytosol 22.54 18.63
KRH13998 Soybean plastid 21.59 18.55
KRH76287 Soybean cytosol 22.74 18.53
KRH40586 Soybean cytosol 22.34 18.44
KRH74111 Soybean plastid 21.52 18.42
KRH02526 Soybean cytosol 19.55 16.16
KRH19417 Soybean endoplasmic reticulum 19.21 15.88
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20EntrezGene:100780239MapMan:22.3.3.1EMBL:ACUP02010821InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_18G035800GO:GO:0000003GO:GO:0000911GO:GO:0001736GO:GO:0003674GO:GO:0005086
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0005886GO:GO:0006810GO:GO:0006897
GO:GO:0007049GO:GO:0007154GO:GO:0007155GO:GO:0007165GO:GO:0007275GO:GO:0008150
GO:GO:0009605GO:GO:0009606GO:GO:0009653GO:GO:0009790GO:GO:0009791GO:GO:0009793
GO:GO:0009826GO:GO:0009880GO:GO:0009942GO:GO:0009987GO:GO:0010087GO:GO:0010274
GO:GO:0010311GO:GO:0010540GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0016192
GO:GO:0030154GO:GO:0032012GO:GO:0032509GO:GO:0040007GO:GO:0042802GO:GO:0042803
GO:GO:0048765GO:GO:0065009GO:GO:0071555UniProt:I1MZA3InterPro:IPR000904InterPro:IPR023394
EnsemblPlants:KRG97867ProteinID:KRG97867ProteinID:KRG97867.1PFAM:PF01369PFAM:PF12783PFscan:PS50190
PANTHER:PTHR44190PANTHER:PTHR44190:SF1SMART:SM00222SUPFAM:SSF48371SUPFAM:SSF48425InterPro:Sec7_C_sf
InterPro:Sec7_NInterPro:Sec7_domInterPro:Sec7_dom_sfUniParc:UPI000233E2CDSEG:seg:
Description
hypothetical protein
Coordinates
chr18:+:2781077..2787829
Molecular Weight (calculated)
165469.0 Da
IEP (calculated)
5.788
GRAVY (calculated)
-0.093
Length
1473 amino acids
Sequence
(BLAST)
0001: MGRLKLQAGI NAIEEEEPEE CDAAYPNKTT LACMINSEIG AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS FKTVRRQIFS WHHHQWQAIN PALYLQPFLD
0101: VIRSDETGAP ITSVALSSVY KILTLDVIDH NTVNVEDAMH LVVDAVTSCR FEVTDPSSEE VVLMKILQVL LACMKSKASI MLSNQHVCTI VNTCFRIVHQ
0201: AGSKGELLQQ IARYTMHELV RCIFSHLQDV GNTDHALVNG STNLKQETGG LDNEYAFGSR QSENGSMTSE YDNQSLSTNS APNAASVVKT TVMDENTAIT
0301: ITGKEGGPHD MHLMTEPYGV PCMVEIFHFL CSLLNVVEHT GMGPRSNTLA FDEDVPLFAL NLINSAIELG GPSICRHPRL LSLIQDELFH NLMQFGLSTS
0401: PLILSMVCSI VLNLYHHLRT ELKLQLEAFF SCVILRLAQS RYGASYQQQE VAMEALVDFC RQKTFMVDMY ANFDCDITCS NVFEDLANLL SKSAFPVNCP
0501: LSAMHILALD GLIAVIQGMA ERIANGSVSS EYSPVNLEEY TPFWMVKCEN YNDPNHWVPF VRRRKYIKRR LMIGADHFNR DPKKGLEFLQ GTHLLPDKLD
0601: PQSVACFFRY TAGLDKNLVG DFLGNHDEFC VQVLHEFAGT FDFQDMNLDT ALRLFLETFR LPGESQKIHR VLEAFSERYY EQSPHILANK DAALVLSYSM
0701: IMLNTDQHNV QVKKKMTEED FIRNNRHING GNDLPREMLT EIYHSICKNE IRTIPEQGVG FPEMTPSRWI DLMHKSKKTA PFIVSDSKAY LDHDMFAIMS
0801: GPTIAAISVV FDHAEQEEVY QTCMDGFLAI AKISACHHLE DVLDDLVVSL CKFTTLLNPS SVEEPVLAFG DDMKARLATV TVFTIANRYG DYIRTGWRNI
0901: LDCILRLHKL GLLPARVASD AADESELSAE TVHGKPIMNS LSSAHMQSIG TPRRSSGLMG RFSQLLSLDT EEPRSQPTEQ QLAAHQRTLQ TIQKCHIDSI
1001: FTESKFLQAE SLLQLARALI WAAGRPQKGN STPEDEDTAV FCLELLIAIT LNNRDRIGIL WQGVYEHISN IVQSTVMPCA LVEKAVFGLL RICQRLLPYK
1101: ENIADELLRS LQLVLKLDAR VADAYCEQIT QEVSRLVKAN ASHIRSQLGW RTITSLLSIT ARHIEASEAG FDALLFIMSD GTHLLPANYI LCVDTARQFA
1201: ESRVGQAERS VRALDLMAGS VNCLAQWTSE AKGAMEEEQM SKLSQDIGEM WLRLVQGLRK VCLDQREEVR NHALLSLQKC LTGADGIYLP YSLWLQCFDL
1301: VIFTVLDDLL EIAQGHSQKD YRNMEGTLIL AMKLLSKVFL QLLPELSQLT TFCKLWLGVL TRMEKYIKVK VRGKRSEKLQ ETMPELLKNS LLVMKMRGIL
1401: AQRSALGGDS LWELTWLHVN NISPSLQLEV FPEQDSEHLQ HKQGESIGGT VPDEKVSMPS SETASREDAG IVG
Best Arabidopsis Sequence Match ( AT1G13980.1 )
(BLAST)
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.