Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0326600-01 | |
| Os03t0666100-00 | |
| Os06t0708400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37878 | Sorghum | cytosol | 91.41 | 78.45 |
| Zm00001d013590_P001 | Maize | mitochondrion | 90.17 | 77.17 |
| TraesCS4D01G016900.1 | Wheat | cytosol | 89.68 | 76.8 |
| TraesCS4B01G018700.1 | Wheat | cytosol | 89.35 | 76.47 |
| TraesCS4A01G294900.1 | Wheat | cytosol | 89.27 | 76.34 |
| HORVU4Hr1G002880.3 | Barley | cytosol | 88.85 | 75.67 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 68.7 | 71.85 |
| Os02t0326600-01 | Rice | cytosol, plasma membrane | 54.91 | 66.77 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 76.05 | 62.65 |
| KRG97867 | Soybean | cytosol | 75.89 | 62.39 |
| AT1G13980.1 | Thale cress | cytosol | 74.24 | 61.96 |
| KRH31013 | Soybean | cytosol | 64.49 | 61.89 |
| CDX98140 | Canola | cytosol | 73.49 | 61.46 |
| Bra019694.1-P | Field mustard | cytosol | 73.49 | 61.46 |
| PGSC0003DMT400072858 | Potato | cytosol | 73.49 | 61.42 |
| Solyc04g005560.2.1 | Tomato | nucleus | 73.16 | 61.4 |
| CDY36422 | Canola | cytosol | 73.41 | 61.35 |
| Solyc05g013040.2.1 | Tomato | cytosol | 73.16 | 61.15 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 39.14 | 57.8 |
| KRH73064 | Soybean | cytosol | 69.03 | 56.79 |
| KRH15072 | Soybean | cytosol | 69.03 | 56.56 |
| KRG97865 | Soybean | cytosol | 67.05 | 55.13 |
| KRH31014 | Soybean | nucleus | 66.72 | 54.85 |
| Os04t0117300-01 | Rice | cytosol, plasma membrane | 17.42 | 31.17 |
| Os03t0246800-02 | Rice | plasma membrane | 9.0 | 15.31 |
| Os06t0622800-01 | Rice | plasma membrane | 7.35 | 13.07 |
| CDY69502 | Canola | cytosol | 1.49 | 6.79 |
| Os02t0193800-01 | Rice | cytosol | 1.16 | 5.96 |
| Os07t0564700-01 | Rice | plasma membrane | 1.07 | 3.78 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | UniProt:A0A0P0W117 | InterPro:ARM-type_fold | ProteinID:BAS85637.1 |
| GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016192 | GO:GO:0032012 | InterPro:IPR000904 |
| InterPro:IPR023394 | EnsemblPlantsGene:Os03g0666100 | EnsemblPlants:Os03t0666100-00 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 |
| PANTHER:PTHR44190 | PANTHER:PTHR44190:SF3 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf |
| InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI000393B87A | SEG:seg | : |
Description
CROWN ROOTLESS 4Similar to GN (GNOM); GTP:GDP antiporter/ protein homodimerization. (Os03t0666100-00)
Coordinates
chr3:+:26202267..26207681
Molecular Weight (calculated)
136062.0 Da
IEP (calculated)
6.084
GRAVY (calculated)
-0.051
Length
1211 amino acids
Sequence
(BLAST)
(BLAST)
0001: NKILVLKGSI KVLQNTFVLI SLSCLQHGAG LPSAFCMLLV QMGGMDKNHP FGIGQMENGN GSYASEAVTS DENSADGSGI VVEPYGIPCM VEIFHFLCSL
0101: LNVVEQIGVD EDLPLFALKL INSAIELGGS SIRKHPKLLS LVQDELFRNL MQFGLSMSPL ILSMVCSIVL NLYHHLRTEL KLQLEAFFSC IILRLAQPRF
0201: GATYHQQEVA MEALVDFCRQ KNFMVEMYAN LDCDITCRNI FEELANLLSK SAFPINCPLS SMHILALEGL ISVIQGMADR IGNATSRPEL LPVELDEYTP
0301: FWTVKCENFS DPQHWVKFVR QRKYVKRRLM IGADHFNRDP KKGLEFLQGT HLLPEKLDPQ SVACFFRYTA GLDKNLVGDF LGNHDEFCVQ VLHEFAQTFD
0401: FQEMNLDTAL RLFLETFRLP GESQKIQRVL EAFSDRYYEQ SPQAFANKDT ALVLAYSIIM LNTDQHNMQV KKKMTEEDFI KNNRNINGGS DLPREMLSEL
0501: YHSICRNEIK TTPEQGMGYF EMSPSRWIDL MRKSKSTSLY IVGDSQPFLD HDMFAIMSGP TIAAIAVVFD HSEHEEVLLA CVDGFLGVAK ISAFHHLEDV
0601: LDDLVVSLCK FTTLLNTSLV EEPVTAFGDD LKARLATETL FTIANRYGDY IRTGWRNVLD CILRLHKLGL LPARVASDAA DDSEVSAETV QGKPTHSSIS
0701: TSHIPVMGTP RKSSGLMGRF SQLLSLDSEE PRSQPTEQQL AAHQRTLQTI QKCRIDSIFT ESKFLQPDSL LQLARALIWA AGRPQKVASS PDDEDTAVFC
0801: LELLIAITLN NRDRIVLLWQ GVYEHIANIV QSTVMPCALV EKAIFGLLRI CQRLLPYKEN LADELLRSLQ LVLKLDARVA DAYCENITQE VARLVKANAG
0901: HVKSQMGWRT VVLLLSITAR HPDASEVGFE AIMYIMSEGA HLSLSNYAFC IEASRQFAES RVGLIDRSIR ALDLMADSAN SLARWSQETK GTGEETDKVL
1001: EAIREMWLKL LQALKKLSLD QREEVRNHAL TSLQRCLTAT EGVCLQSSTW SHAFDLVIFA LLDDLLEISQ NHSQKDYRNM EGSLVLAMKL VAKVYLQLLP
1101: DLFGLSSFCK LWLGVLSRME KYIKIKVRGK RSDKLQELIP ELLKNILIAM KNRGILAKRS TIGGDSLWEL TWLHANNIST SLQSDVFPSQ EYEQHSSAGS
1201: PRGPNGVESR D
0101: LNVVEQIGVD EDLPLFALKL INSAIELGGS SIRKHPKLLS LVQDELFRNL MQFGLSMSPL ILSMVCSIVL NLYHHLRTEL KLQLEAFFSC IILRLAQPRF
0201: GATYHQQEVA MEALVDFCRQ KNFMVEMYAN LDCDITCRNI FEELANLLSK SAFPINCPLS SMHILALEGL ISVIQGMADR IGNATSRPEL LPVELDEYTP
0301: FWTVKCENFS DPQHWVKFVR QRKYVKRRLM IGADHFNRDP KKGLEFLQGT HLLPEKLDPQ SVACFFRYTA GLDKNLVGDF LGNHDEFCVQ VLHEFAQTFD
0401: FQEMNLDTAL RLFLETFRLP GESQKIQRVL EAFSDRYYEQ SPQAFANKDT ALVLAYSIIM LNTDQHNMQV KKKMTEEDFI KNNRNINGGS DLPREMLSEL
0501: YHSICRNEIK TTPEQGMGYF EMSPSRWIDL MRKSKSTSLY IVGDSQPFLD HDMFAIMSGP TIAAIAVVFD HSEHEEVLLA CVDGFLGVAK ISAFHHLEDV
0601: LDDLVVSLCK FTTLLNTSLV EEPVTAFGDD LKARLATETL FTIANRYGDY IRTGWRNVLD CILRLHKLGL LPARVASDAA DDSEVSAETV QGKPTHSSIS
0701: TSHIPVMGTP RKSSGLMGRF SQLLSLDSEE PRSQPTEQQL AAHQRTLQTI QKCRIDSIFT ESKFLQPDSL LQLARALIWA AGRPQKVASS PDDEDTAVFC
0801: LELLIAITLN NRDRIVLLWQ GVYEHIANIV QSTVMPCALV EKAIFGLLRI CQRLLPYKEN LADELLRSLQ LVLKLDARVA DAYCENITQE VARLVKANAG
0901: HVKSQMGWRT VVLLLSITAR HPDASEVGFE AIMYIMSEGA HLSLSNYAFC IEASRQFAES RVGLIDRSIR ALDLMADSAN SLARWSQETK GTGEETDKVL
1001: EAIREMWLKL LQALKKLSLD QREEVRNHAL TSLQRCLTAT EGVCLQSSTW SHAFDLVIFA LLDDLLEISQ NHSQKDYRNM EGSLVLAMKL VAKVYLQLLP
1101: DLFGLSSFCK LWLGVLSRME KYIKIKVRGK RSDKLQELIP ELLKNILIAM KNRGILAKRS TIGGDSLWEL TWLHANNIST SLQSDVFPSQ EYEQHSSAGS
1201: PRGPNGVESR D
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.