Factsheet for GSMUA_Achr1P09290_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P34520_001	Banana	cytosol	11.84	88.34
HORVU6Hr1G034130.6	Barley	plastid	66.89	66.01
TraesCS6B01G195700.1	Wheat	plastid	66.47	65.76
TraesCS6A01G168000.1	Wheat	plastid	66.47	65.76
TraesCS6D01G157000.1	Wheat	plastid	66.41	65.7
KXG29692	Sorghum	plastid	66.77	65.55
Zm00001d053688_P002	Maize	plastid	66.11	64.97
Os06t0622800-01	Rice	plasma membrane	26.26	64.17
VIT_03s0038g04090.t01	Wine grape	mitochondrion, plasma membrane, plastid	65.2	63.75
HORVU7Hr1G093440.3	Barley	plastid	64.3	63.5
TraesCS7D01G392600.1	Wheat	cytosol, plasma membrane, plastid	64.3	63.35
TraesCS7A01G398300.1	Wheat	cytosol, plastid	64.18	63.16
Solyc01g112350.2.1	Tomato	extracellular, golgi, plasma membrane	51.8	62.83
OQU76719	Sorghum	plastid	62.44	62.44
TraesCS7B01G299100.1	Wheat	cytosol	62.86	61.82
KRH13998	Soybean	plastid	63.58	61.73
Zm00001d046717_P009	Maize	plastid	63.4	61.48
KRH74111	Soybean	plastid	63.52	61.42
AT4G38200.1	Thale cress	cytosol, mitochondrion, plastid	60.22	59.4
CDY59102	Canola	cytosol, mitochondrion, plastid	59.8	58.74
CDY54791	Canola	mitochondrion, nucleus, plastid	59.74	58.68
Bra033555.1-P	Field mustard	plastid	59.07	58.23
CDX69135	Canola	plastid	55.77	54.98
CDX75498	Canola	mitochondrion, plasma membrane, plastid	55.71	54.92
Bra011611.1-P	Field mustard	plastid	55.65	54.57
AT4G35380.1	Thale cress	cytosol, plasma membrane, plastid	55.59	54.22
GSMUA_Achr5P18830_001	Banana	cytosol	50.3	48.89
Solyc01g112340.2.1	Tomato	plastid	11.96	47.61
GSMUA_Achr8P19420_001	Banana	cytosol	49.46	47.24
GSMUA_Achr2P14140_001	Banana	cytosol, extracellular, nucleus	30.29	28.62
GSMUA_Achr4P27650_001	Banana	cytosol, extracellular, plastid	30.71	28.47
GSMUA_Achr6P22810_001	Banana	golgi	15.5	22.28
GSMUA_Achr6P03140_001	Banana	cytosol, nucleus, plastid	9.98	20.24
GSMUA_Achr1P23070_001	Banana	cytosol, nucleus, peroxisome	10.82	17.68

Protein Annotations

Gene3D:1.10.1000.11	Gene3D:1.10.220.20	MapMan:22.3.3.2	InterPro:ARM-type_fold	ncoils:Coil	InterPro:DCB_dom
GO:GO:0003674	GO:GO:0005086	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0032012	GO:GO:0065009	EnsemblPlantsGene:GSMUA_Achr1G09290_001	EnsemblPlants:GSMUA_Achr1P09290_001
EnsemblPlants:GSMUA_Achr1T09290_001	InterPro:IPR000904	InterPro:IPR023394	UniProt:M0RYD8	PFAM:PF01369	PFAM:PF09324
PFAM:PF12783	PFAM:PF16213	PFscan:PS50190	PANTHER:PTHR10663	PANTHER:PTHR10663:SF108	SMART:SM00222
SUPFAM:SSF48371	SUPFAM:SSF48425	InterPro:Sec7_C	InterPro:Sec7_C_sf	InterPro:Sec7_N	InterPro:Sec7_dom
InterPro:Sec7_dom_sf	UniParc:UPI0002955E7E	SEG:seg	:	:	:

Description

guanine nucleotide exchange family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G09290_001]

Coordinates

chr1:-:7128614..7145920

Molecular Weight (calculated)

184217.0 Da

IEP (calculated)

5.579

GRAVY (calculated)

0.031

Length

1664 amino acids

Sequence
(BLAST)

0001: MAFFQSLGGS SRAGRVLGPA LDKIIKNAAW RKHSNLVSAC KAALDHLDGL SDSPDIADPS PLLGLPFAAA DSLLQPLVIA IDSASPKVAE PALECSQKLF
0101: SHGLLRGEIN LQTDADDAPR SAASRLLASV CSCGGIGDEA IELAMLRVLI AAVRSPAVLV RDECLAQIVR SCYNVYLGSQ SGANQLCAKL VLAQMLVIIC
0201: ARVEADAMDV VRVRTVSIAD MMDLSDRNLN DSTLVQAAQN FINEVMEGNE AEPLPSKSHK GEGSVPTVSS EGEGAVNGGV SGGLSKIRED GLFLFKNLCK
0301: LSMKFSTQEN PEDPLLLRGK VLSLELLKLA IENAGPLWRT NERQVRMCKL SPLDEFIPAA ALHSFSPIED CFPSQDHCLN ILLPVLCRFL GAIKQYLCLS
0401: LLKNSALSVM SIFQLLCSIF MGLLSSFLQK MTVLNLLETI CQDPQIMVDI FVNYDCDVNA PNIFERVVNG LLKTGLGVPP GSVTSLSPAQ DSTLRVESVK
0501: CLAGIIKSMG AWMDQQLKIG VFAPQSLEKE HSAENLTALN GEEGTIVEYE LHSDANSELS DAATLEQRRA YKLEFQKGVS LFNRKPSKGI DFLIKTKKIG
0601: ASPEEVASFL KITSGLNAAM IGDYLGEREE FPLKVMHAYV DSIDFEGMNF GEAIRFFLRG FRLPGEAQKI DRIMEKFAER YCKCNPSSFT SADTAYVLAY
0701: SVIMLNTDAH NNMVKDKMSK AEFIRNNRGI DDGKDLPEDY LSSLYDQIVK SEIKISVDSS APQTEEKALG ANDLLIRHNQ EQFKAKSGKS ESMFYAATDT
0801: AILRFMIEVC WAPMMAAFSV TLDQSDDKSA TAQCLQGFRY AVHVTSVMHM QTQRDAFVTS VAKFTYLHCA ADMKQKNVDA VKAIVSIAIE DGNYLQESWE
0901: HIFTCLSRFE HLHLLGEGAP PDASFFTAPL TESEERSQKT LAVTSMKRKG NALQNPAVMA VIGSFELNHI FAHSQRLNGD AIVAFVRALC KVSMTELQSP
1001: TDPRVFSLTK IVEIAHYNMN RIRLVWSRIW NVLAEFFVSV GLSENLSVAI FVMDSLRQLA MKFLEREELA NYNFQNEFLR PFVVVMQKSV SSEIRELIVR
1101: CVSQMVLGRV NHVKSGWKSV FTVFTIAAAD ERKSIVLLAF GTMEKIVRDY FPYITETETT TFTDCVKCLI AFTNSRFNSD ASLNAIAFLR FCAVKLAEGG
1201: LVCYDKNSDG HLGNGDALDG NNLTEKDDHA FFWLPLLDGL SKLTSDPRPT IRKGALEVFF DILKDHGHLF SSHLWINILK SAISSIVNNP RHMLVGQVSP
1301: VHNSQYMEDD SWKSETDTLA AKCLVDLFVK FFDVVRSQLA NVVAIITSFL SSPYKQYANT GMAALLHLAA SLGSKLSEAE WKDILVPLKE SAASMLPVFS
1401: NIIKIMQNVE VPDRNQPYSD GEQYSDHEFI NDDEEEANME TASYAIVRMK NHISVQLQIV QVVKKLYEVH RKYFSAAHVT ILLEILSSIA SHSSEVSNES
1501: AVQLKMQKAC SLLEISDPPI VHFENESYQN LLKFLQTLLT EDEFVSHELR IESEVVSVCQ KILQIYLNCA GHELTDQISN TSPALHWILP LGSAKREELA
1601: ARASLAVLSL QVLSSLERDS FKRNLPCIFP LLVNLIRCEH SSSEVQHVLF DIFQSLVGPA IMNL

Best Arabidopsis Sequence Match ( AT4G38200.1 )
(BLAST)

0001: MSSSQNLGGA TRCGRVIGPS LDKIIKNAAW RKHTFLVSAC KSVLDKLEAL SDSPDPSSPL FGLTTSDADA VLQPLLLSLD TGYAKVIEPA LDCSFKLFSL
0101: SLLRGEVCSS SPDSLLYKLI HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIML IVFTRSEANS
0201: MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
0301: VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV
0401: LSLLENICHD PNLIIDIFVN FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM DQQLSVGDSL LPKSLENEAP
0501: ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
0601: MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD
0701: GKDLPEEYLG ALYDQVVINE IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG KSESAYHVVT DVAILRFMVE
0801: VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
0901: IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL
1001: KTEAIVAFVK ALCKVSMSEL QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR QLSMKFLERE ELANYNFQNE
1101: FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201: TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT
1301: FWIGVFSSVI YPIFNSVWGE NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA GLIRSPAQGP TVAGVGALLR
1401: LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501: ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD
1601: ELEETRQPKN WILPMGAASK EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC MGAMMDE

Arabidopsis Description

BIG1Brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JSZ5]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.