Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69135 | Canola | plastid | 90.56 | 91.53 |
| CDX75498 | Canola | mitochondrion, plasma membrane, plastid | 90.04 | 91.0 |
| Bra011611.1-P | Field mustard | plastid | 90.45 | 90.93 |
| AT4G38200.1 | Thale cress | cytosol, mitochondrion, plastid | 67.41 | 68.17 |
| Solyc01g112350.2.1 | Tomato | extracellular, golgi, plasma membrane | 51.35 | 63.85 |
| VIT_03s0038g04090.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 63.25 | 63.4 |
| KRH13998 | Soybean | plastid | 62.95 | 62.66 |
| KRH74111 | Soybean | plastid | 62.6 | 62.06 |
| GSMUA_Achr8P34520_001 | Banana | cytosol | 7.74 | 59.19 |
| KXG29692 | Sorghum | plastid | 55.63 | 55.99 |
| Zm00001d053688_P002 | Maize | plastid | 55.22 | 55.64 |
| GSMUA_Achr1P09290_001 | Banana | mitochondrion | 54.22 | 55.59 |
| TraesCS6A01G168000.1 | Wheat | plastid | 54.69 | 55.47 |
| TraesCS6D01G157000.1 | Wheat | plastid | 54.63 | 55.41 |
| TraesCS6B01G195700.1 | Wheat | plastid | 54.57 | 55.35 |
| HORVU6Hr1G034130.6 | Barley | plastid | 54.57 | 55.22 |
| HORVU7Hr1G093440.3 | Barley | plastid | 53.58 | 54.24 |
| TraesCS7D01G392600.1 | Wheat | cytosol, plasma membrane, plastid | 53.63 | 54.17 |
| TraesCS7A01G398300.1 | Wheat | cytosol, plastid | 53.63 | 54.11 |
| OQU76719 | Sorghum | plastid | 51.82 | 53.12 |
| TraesCS7B01G299100.1 | Wheat | cytosol | 52.23 | 52.66 |
| Zm00001d046717_P009 | Maize | plastid | 52.7 | 52.39 |
| Os06t0622800-01 | Rice | plasma membrane | 19.23 | 48.16 |
| Solyc01g112340.2.1 | Tomato | plastid | 11.31 | 46.17 |
| AT1G01960.1 | Thale cress | cytosol | 46.31 | 45.14 |
| AT3G60860.1 | Thale cress | cytosol | 47.13 | 44.84 |
| AT3G43300.1 | Thale cress | cytosol | 31.07 | 30.15 |
| AT1G13980.1 | Thale cress | cytosol | 17.64 | 20.74 |
| AT5G39500.1 | Thale cress | cytosol | 16.94 | 20.03 |
| AT5G19610.1 | Thale cress | cytosol | 15.42 | 19.13 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.2 | EntrezGene:829691 | ProteinID:AEE86505.1 | InterPro:ARM-type_fold |
| ArrayExpress:AT4G35380 | EnsemblPlantsGene:AT4G35380 | RefSeq:AT4G35380 | TAIR:AT4G35380 | RefSeq:AT4G35380-TAIR-G | EnsemblPlants:AT4G35380.1 |
| TAIR:AT4G35380.1 | Unigene:At.2277 | ProteinID:CAA18731.1 | ProteinID:CAB80255.1 | InterPro:DCB_dom | UniProt:F4JN05 |
| GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0032012 | GO:GO:0032588 | GO:GO:0065009 | InterPro:IPR000904 | InterPro:IPR023394 | InterPro:Mon2_C |
| RefSeq:NP_195264.2 | PFAM:PF01369 | PFAM:PF09324 | PFAM:PF12783 | PFAM:PF16206 | PFAM:PF16213 |
| PO:PO:0000230 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020094 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS50190 | PANTHER:PTHR10663 | PANTHER:PTHR10663:SF108 | SMART:SM00222 | SUPFAM:SSF48371 |
| SUPFAM:SSF48425 | InterPro:Sec7_C | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf |
| UniParc:UPI000034F17A | SEG:seg | : | : | : | : |
Description
BIG4Brefeldin A-inhibited guanine nucleotide-exchange protein 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JN05]
Coordinates
chr4:+:16819792..16826147
Molecular Weight (calculated)
190836.0 Da
IEP (calculated)
5.871
GRAVY (calculated)
-0.034
Length
1706 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTSQTLGGA TRCGRIIGPS LDKIIKNAAW RKHTYLVSSC KSVLDKLESL PDDFHDPSSV VSGLAASDAD SVLQPFLLSL ETAYSKVVEP SLDCAFKLFS
0101: LSILRGEIQS SKQDSILFKL VNAVSKVGAI AEEPIQLAVL RVLLAAVRSP CILIRGDCLL HVVKTCYNIY LGGLSGTTQI CAKSVLAQMM LVIFTRSEED
0201: SLDVSVKTIY VNELLTFTDK SVNEGSSVYF CQGFVNEVMA AGQGSPLPPP DVIQILLQNP ETETVMTPDS PSFRGYVANG EGDSETGDMS KVRQDAFLLF
0301: KNLCKLSMRF SSKENNDDQI MVRGKTLSLE LLKVIIDNGG SVWRTNESFI NAVKQYLCLS LLKNSAVSIM SIFQLQCAIF MSLLSKLRSV LKAEIGIFFP
0401: MIVLRVLENV LQPSYLQKMT VLNLLDKMSQ DPQLMVDIFV NYDCDVESSN ILERIVNGLL KTALGPPTGS STTLSPAQDS TFRNDSVKCL VNLAKAMGNW
0501: MDQQLKVNET VWPKGSQVYA SMDSNASQIS ELEGTISDCD SQPDTSNPEA YDASMLEQRR AYKIELQKGI SLFNRKPSKG VEFLISTKKI GSSPEEVASF
0601: LMKTAGLNGT VIGDYLGERD ELPLKVMHAY VDSFNFEKKD FVEAIRFFLR GFRLPGEAQK IDRIMEKFAE HYWKCNPGSF TSADTAYVLA YSVIMLNTDA
0701: HNNMVKDKMT KADFVRNNRG IDDGKDLPEE YLGSLYDRVV KEEIRMNSDT LAPQNKQVNG LNKLLGLDGI LNLVSWMQPD EKPHGANGRL IRDIQEQFQA
0801: KPEKSESVYH TVTDISILRF ILEVSWGPML AAFSVTIDQS DDRLATSLCL QGFRYAVHVT AVMGMQTQRD AFVTSMAKFT NLHCAADMKQ KNVDAVKAII
0901: TIAIEDGNHL HGSWEHILTC LSRIEHLQLL GEVSPSEKRY VPTKKAEVDD KKALGFPNLK KRGSFQNPSV MAVVRGGSYD STSLVKSVPK LVTPEQIKSF
1001: IANLNLLDQI GNFELNHVYA NSQRLNSEAI VSFVKALCKV SMSELQSPTD PRVFSLTKLV ETAHYNMNRI RLVWSRIWNV LSDFFVSVGL SENLSVAIFV
1101: MDSLRQLSMK FLEREELANY HFQHEFLRPF VVVMQKSSSA EIRELIVRCV SQMVLSRVSN VKSGWKNVFT VFTTAALDER KNIVLLAFET IEKIVRDHFH
1201: CIIETEITVY ADCIRCLITF TNSKFEGDIG FNTIEFLRFC ALKLEEGGLV LNEKLKNNTI SALKEDFSDT QSFTDLDEQV SYWIPLLTGL CKQVSDPRPA
1301: IRKRSIEVLF HILMDHGHLF TRPFWTGIFS SIILPVFNNI RSKTDMLFEE SVDSPSSASL DTEETTWDVE TSTLALQLLV DLLVKFFRSV RSQLPSVVSI
1401: IVGFIKSPFQ GSTGSGISVL LHLADGLARS ASEDEWREIF LALKEAASLT FAGFMKVLRT MDDIEDVETL SGQSVNIGDL DDDSLHIMSY VVSRTKKHID
1501: VLSQIVEVVS DLYRRNQFSL SASHVDILAD IFSCIASHAQ QLNTDTVLRR KFKRACSVQN LTEPQLLNFE NEAYKSYMMF LQDMVTCNPN VSKELDLESR
1601: LVTECAKIVK IYLKCTDPQQ QEQQQRKPVL WVLPMESDRV EEATARTSLL VSSLEALCSL EAESLKKHVS SFFPLLVDLV RTEHCSPQVP YVLSNVLKSC
1701: IGPILA
0101: LSILRGEIQS SKQDSILFKL VNAVSKVGAI AEEPIQLAVL RVLLAAVRSP CILIRGDCLL HVVKTCYNIY LGGLSGTTQI CAKSVLAQMM LVIFTRSEED
0201: SLDVSVKTIY VNELLTFTDK SVNEGSSVYF CQGFVNEVMA AGQGSPLPPP DVIQILLQNP ETETVMTPDS PSFRGYVANG EGDSETGDMS KVRQDAFLLF
0301: KNLCKLSMRF SSKENNDDQI MVRGKTLSLE LLKVIIDNGG SVWRTNESFI NAVKQYLCLS LLKNSAVSIM SIFQLQCAIF MSLLSKLRSV LKAEIGIFFP
0401: MIVLRVLENV LQPSYLQKMT VLNLLDKMSQ DPQLMVDIFV NYDCDVESSN ILERIVNGLL KTALGPPTGS STTLSPAQDS TFRNDSVKCL VNLAKAMGNW
0501: MDQQLKVNET VWPKGSQVYA SMDSNASQIS ELEGTISDCD SQPDTSNPEA YDASMLEQRR AYKIELQKGI SLFNRKPSKG VEFLISTKKI GSSPEEVASF
0601: LMKTAGLNGT VIGDYLGERD ELPLKVMHAY VDSFNFEKKD FVEAIRFFLR GFRLPGEAQK IDRIMEKFAE HYWKCNPGSF TSADTAYVLA YSVIMLNTDA
0701: HNNMVKDKMT KADFVRNNRG IDDGKDLPEE YLGSLYDRVV KEEIRMNSDT LAPQNKQVNG LNKLLGLDGI LNLVSWMQPD EKPHGANGRL IRDIQEQFQA
0801: KPEKSESVYH TVTDISILRF ILEVSWGPML AAFSVTIDQS DDRLATSLCL QGFRYAVHVT AVMGMQTQRD AFVTSMAKFT NLHCAADMKQ KNVDAVKAII
0901: TIAIEDGNHL HGSWEHILTC LSRIEHLQLL GEVSPSEKRY VPTKKAEVDD KKALGFPNLK KRGSFQNPSV MAVVRGGSYD STSLVKSVPK LVTPEQIKSF
1001: IANLNLLDQI GNFELNHVYA NSQRLNSEAI VSFVKALCKV SMSELQSPTD PRVFSLTKLV ETAHYNMNRI RLVWSRIWNV LSDFFVSVGL SENLSVAIFV
1101: MDSLRQLSMK FLEREELANY HFQHEFLRPF VVVMQKSSSA EIRELIVRCV SQMVLSRVSN VKSGWKNVFT VFTTAALDER KNIVLLAFET IEKIVRDHFH
1201: CIIETEITVY ADCIRCLITF TNSKFEGDIG FNTIEFLRFC ALKLEEGGLV LNEKLKNNTI SALKEDFSDT QSFTDLDEQV SYWIPLLTGL CKQVSDPRPA
1301: IRKRSIEVLF HILMDHGHLF TRPFWTGIFS SIILPVFNNI RSKTDMLFEE SVDSPSSASL DTEETTWDVE TSTLALQLLV DLLVKFFRSV RSQLPSVVSI
1401: IVGFIKSPFQ GSTGSGISVL LHLADGLARS ASEDEWREIF LALKEAASLT FAGFMKVLRT MDDIEDVETL SGQSVNIGDL DDDSLHIMSY VVSRTKKHID
1501: VLSQIVEVVS DLYRRNQFSL SASHVDILAD IFSCIASHAQ QLNTDTVLRR KFKRACSVQN LTEPQLLNFE NEAYKSYMMF LQDMVTCNPN VSKELDLESR
1601: LVTECAKIVK IYLKCTDPQQ QEQQQRKPVL WVLPMESDRV EEATARTSLL VSSLEALCSL EAESLKKHVS SFFPLLVDLV RTEHCSPQVP YVLSNVLKSC
1701: IGPILA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.