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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44841 Canola cytosol 92.32 93.81
Bra019446.1-P Field mustard cytosol 92.49 93.07
CDY30954 Canola extracellular, golgi 42.26 89.2
KRH19417 Soybean endoplasmic reticulum 75.54 74.52
VIT_11s0016g00170.t01 Wine grape cytosol, plastid 75.54 73.9
KRH02526 Soybean cytosol 74.8 73.79
TraesCS2B01G230000.1 Wheat cytosol, golgi 66.84 70.78
TraesCS2A01G202900.1 Wheat cytosol 63.77 70.73
KXG36486 Sorghum cytosol 68.54 70.67
Zm00001d006607_P066 Maize cytosol 68.43 70.1
HORVU2Hr1G040020.14 Barley cytosol 68.26 70.01
Zm00001d021806_P005 Maize cytosol 68.49 69.96
TraesCS2D01G212800.2 Wheat golgi 67.8 69.5
Solyc12g017830.1.1 Tomato plastid 68.94 68.47
GSMUA_Achr2P14140_001 Banana cytosol, extracellular, nucleus 66.78 66.67
GSMUA_Achr4P27650_001 Banana cytosol, extracellular, plastid 68.03 66.63
Os07t0564700-01 Rice plasma membrane 10.24 52.33
AT3G60860.1 Thale cress cytosol 34.76 34.08
AT1G01960.1 Thale cress cytosol 33.73 33.89
AT4G38200.1 Thale cress cytosol, mitochondrion, plastid 31.06 32.37
AT4G35380.1 Thale cress cytosol, plasma membrane, plastid 30.15 31.07
AT1G13980.1 Thale cress cytosol 15.19 18.4
AT5G39500.1 Thale cress cytosol 14.79 18.02
AT5G19610.1 Thale cress cytosol 13.71 17.53
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20MapMan:22.3.3.2EntrezGene:823405InterPro:ARM-type_foldArrayExpress:AT3G43300
EnsemblPlantsGene:AT3G43300RefSeq:AT3G43300TAIR:AT3G43300RefSeq:AT3G43300-TAIR-GEnsemblPlants:AT3G43300.1TAIR:AT3G43300.1
Symbol:ATMIN7Unigene:At.46655InterPro:DCB_domGO:GO:0003674GO:GO:0005086GO:GO:0005488
GO:GO:0005515GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0032012
InterPro:IPR000904InterPro:IPR023394PFAM:PF01369PFAM:PF09324PFAM:PF12783PFAM:PF16213
PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50190PANTHER:PTHR10663PANTHER:PTHR10663:SF312
SMART:SM00222SUPFAM:SSF48371SUPFAM:SSF48425InterPro:Sec7_CInterPro:Sec7_C_sfInterPro:Sec7_N
InterPro:Sec7_domInterPro:Sec7_dom_sfUniParc:UPI000173929ESEG:seg::
Description
ATMIN7HOPM interactor 7 [Source:TAIR;Acc:AT3G43300]
Coordinates
chr3:-:15233896..15245034
Molecular Weight (calculated)
195067.0 Da
IEP (calculated)
5.259
GRAVY (calculated)
-0.179
Length
1758 amino acids
Sequence
(BLAST)
0001: MAAGGFLTRA FDTMLKESGG KKFPDLQKAI QAYQDGSKVV TQAAPSSIVE SSQAEGGGEK TGVEADEPQK VTSAEVAQQA SQSKSETINV SLANAGHTLG
0101: GAEVELVLKP LRLAFETKNL KIFDAALDCL HKLIAYDHLE GDPGLDGGKN SAPFTDILNM VCSCVDNSSP DSTVLQVLKV LLTAVASGKF KVHGEPLLGV
0201: IRVCYNIALN SKSPINQATS KAMLTQMISI VFRRMETDIV SASSTVSQEE HVSGDTSSPK NEEITAADEN EKEMTLGDAL TQAKDTTLAS VEELHTLVGG
0301: ADIKGLEAAL DKAVHLEDGK KIKRGIELES MSIGQRDALL VFRTLCKMGM KEDSDEVTTK TRILSLELLQ GMLEGVSHSF TKNFHFIDSV KAYLSYALLR
0401: ASVSQSSVIF QYASGIFSVL LLRFRDSLKV SMDCYLSPYF SDPKSHSQGE IGIFFPIIVL RSLDNSECPN DQKMGVLRML EKVCKDPQML VDVYVNYDCD
0501: LEAPNLFERM VTTLSKIAQG SQSADPNPAM ASQTASVKGS SLQCLVNVLK SLVDWEKIRR EAENSTRNAN EDSASTGEPI ETKSREDVPS NFEKAKAHKS
0601: TMEAAISEFN RNSVKGVEYL IANKLVERNP ASVAQFLRST SSLSKVMIGD YLGQHEEFPL AVMHAYVDSM KFSEMKFHSA IREFLKGFRL PGEAQKIDRI
0701: MEKFAERYCA DNPGLFKNAD TAYVLAYAVI MLNTDAHNPM VWPKMSKSDF TRMNATNDPE DCAPTELLEE IYDSIVQEEI KLKDDDTMKK LSSQRPGGEE
0801: RGGLVSILNL GLPKRISAAD AKSETEDIVR KTQEIFRKHG VKRGVFHTVE QVDIIRPMVE AVGWPLLAAF SVTMEVGDNK PRILLCMEGF KAGIHIAYVL
0901: GMDTMRYAFL TSLVRFTFLH APKEMRSKNV EALRILLGLC DSEPDTLQDT WNAVLECVSR LEFIISTPGI AATVMHGSNQ ISRDGVVQSL KELAGRPAEQ
1001: VFVNSVKLPS ESVVEFFTAL CGVSAEELKQ SPARVFSLQK LVEISYYNIA RIRMVWARIW SVLAEHFVSA GSHHDEKIAM YAIDSLRQLG MKYLERAELT
1101: NFTFQNDILK PFVIIMRNTQ SQTIRSLIVD CIVQMIKSKV GSIKSGWRSV FMIFTAAADD EVESIVEKSF ENVEQVILEH FDQVIGDCFM DCVNCLIRFA
1201: NNKASDRISL KAIALLRICE DRLAEGLIPG GVLKPVDGNE DETFDVTEHY WFPMLAGLSD LTSDYRPEVR NCALEVLFDL LNERGNKFST PFWESIFHRI
1301: LFPIFDHVSH AGKESLISSG DVKFRETSIH SLQLLCNLFN TFYKEVCFML PPLLSLLLDC AKKSDQTVVS ISLGALVHLI EVGGHQFSEG DWDMLLKSIR
1401: DASYTTQPLE LLNALSFDNP KKNLVLAGDI EADASDSPRV DRNPDDIKDN GKVSAQASPR IGTHGTSLES GIPPKADGSE GRPSSSGRAQ KDVDDVNLQR
1501: SQTFGQRFMD NLFLRNLTSQ PKSSVAEVTV PSSPYKHEDP TEPDSREEES PALGAIRGKC ITQLLLLGAI NSIQQKYWSN LKTPQKIAIM DILFSFIEFA
1601: SSYNSYSNLR TRMNHIPTER PPLNLLRQEL EGTTIYLDVL QKTTSGLADD ASNSEDRLEG AAEEKLVSFC EQVLKETSDL QSTLGETTNM DVHRVLELRS
1701: PVIVKVLEGM CFMNNTIFRK HMREFYPLLT RLVCCEQMEI RGALANLFKA QLKPLLQQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.