Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59102 | Canola | cytosol, mitochondrion, plastid | 92.06 | 91.68 |
| CDY54791 | Canola | mitochondrion, nucleus, plastid | 91.52 | 91.15 |
| Bra033555.1-P | Field mustard | plastid | 90.28 | 90.23 |
| Solyc01g112350.2.1 | Tomato | extracellular, golgi, plasma membrane | 55.9 | 68.73 |
| VIT_03s0038g04090.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 69.12 | 68.51 |
| KRH13998 | Soybean | plastid | 69.24 | 68.14 |
| KRH74111 | Soybean | plastid | 69.41 | 68.04 |
| AT4G35380.1 | Thale cress | cytosol, plasma membrane, plastid | 68.17 | 67.41 |
| GSMUA_Achr8P34520_001 | Banana | cytosol | 8.6 | 65.02 |
| GSMUA_Achr1P09290_001 | Banana | mitochondrion | 59.4 | 60.22 |
| TraesCS6D01G157000.1 | Wheat | plastid | 58.51 | 58.68 |
| TraesCS6A01G168000.1 | Wheat | plastid | 58.51 | 58.68 |
| TraesCS6B01G195700.1 | Wheat | plastid | 58.45 | 58.62 |
| HORVU6Hr1G034130.6 | Barley | plastid | 58.39 | 58.42 |
| KXG29692 | Sorghum | plastid | 58.39 | 58.11 |
| Zm00001d053688_P002 | Maize | plastid | 58.27 | 58.06 |
| HORVU7Hr1G093440.3 | Barley | plastid | 57.32 | 57.39 |
| TraesCS7D01G392600.1 | Wheat | cytosol, plasma membrane, plastid | 57.38 | 57.31 |
| TraesCS7A01G398300.1 | Wheat | cytosol, plastid | 57.08 | 56.95 |
| OQU76719 | Sorghum | plastid | 55.54 | 56.31 |
| Zm00001d046717_P009 | Maize | plastid | 56.79 | 55.83 |
| TraesCS7B01G299100.1 | Wheat | cytosol | 55.66 | 55.5 |
| Os06t0622800-01 | Rice | plasma membrane | 21.7 | 53.74 |
| Solyc01g112340.2.1 | Tomato | plastid | 12.45 | 50.24 |
| AT1G01960.1 | Thale cress | cytosol | 48.9 | 47.14 |
| AT3G60860.1 | Thale cress | cytosol | 48.19 | 45.34 |
| AT3G43300.1 | Thale cress | cytosol | 32.37 | 31.06 |
| AT1G13980.1 | Thale cress | cytosol | 18.02 | 20.95 |
| AT5G19610.1 | Thale cress | cytosol | 16.42 | 20.15 |
| AT5G39500.1 | Thale cress | cytosol | 16.72 | 19.54 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.2 | EntrezGene:829976 | UniProt:A0A178UXZ2 | ProteinID:AEE86892.1 |
| EMBL:AK227209 | InterPro:ARM-type_fold | ArrayExpress:AT4G38200 | EnsemblPlantsGene:AT4G38200 | RefSeq:AT4G38200 | TAIR:AT4G38200 |
| RefSeq:AT4G38200-TAIR-G | EnsemblPlants:AT4G38200.1 | TAIR:AT4G38200.1 | Unigene:At.31191 | ProteinID:CAB37560.1 | ProteinID:CAB80485.1 |
| InterPro:DCB_dom | UniProt:F4JSZ5 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005086 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0032012 | GO:GO:0065009 | InterPro:IPR000904 |
| InterPro:IPR023394 | RefSeq:NP_195533.2 | ProteinID:OAO98839.1 | PFAM:PF01369 | PFAM:PF09324 | PFAM:PF12783 |
| PFAM:PF16213 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50190 | PANTHER:PTHR10663 | PANTHER:PTHR10663:SF108 |
| SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C | InterPro:Sec7_C_sf | InterPro:Sec7_N |
| InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI0001E92F1A | SEG:seg | : | : |
Description
BIG1Brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JSZ5]
Coordinates
chr4:+:17915206..17922732
Molecular Weight (calculated)
187548.0 Da
IEP (calculated)
5.338
GRAVY (calculated)
-0.017
Length
1687 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSSQNLGGA TRCGRVIGPS LDKIIKNAAW RKHTFLVSAC KSVLDKLEAL SDSPDPSSPL FGLTTSDADA VLQPLLLSLD TGYAKVIEPA LDCSFKLFSL
0101: SLLRGEVCSS SPDSLLYKLI HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIML IVFTRSEANS
0201: MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
0301: VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV
0401: LSLLENICHD PNLIIDIFVN FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM DQQLSVGDSL LPKSLENEAP
0501: ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
0601: MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD
0701: GKDLPEEYLG ALYDQVVINE IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG KSESAYHVVT DVAILRFMVE
0801: VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
0901: IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL
1001: KTEAIVAFVK ALCKVSMSEL QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR QLSMKFLERE ELANYNFQNE
1101: FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201: TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT
1301: FWIGVFSSVI YPIFNSVWGE NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA GLIRSPAQGP TVAGVGALLR
1401: LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501: ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD
1601: ELEETRQPKN WILPMGAASK EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC MGAMMDE
0101: SLLRGEVCSS SPDSLLYKLI HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIML IVFTRSEANS
0201: MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
0301: VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV
0401: LSLLENICHD PNLIIDIFVN FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM DQQLSVGDSL LPKSLENEAP
0501: ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
0601: MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD
0701: GKDLPEEYLG ALYDQVVINE IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG KSESAYHVVT DVAILRFMVE
0801: VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
0901: IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL
1001: KTEAIVAFVK ALCKVSMSEL QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR QLSMKFLERE ELANYNFQNE
1101: FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201: TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT
1301: FWIGVFSSVI YPIFNSVWGE NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA GLIRSPAQGP TVAGVGALLR
1401: LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501: ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD
1601: ELEETRQPKN WILPMGAASK EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC MGAMMDE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.