Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75498 | Canola | mitochondrion, plasma membrane, plastid | 99.23 | 99.23 |
| AT4G35380.1 | Thale cress | cytosol, plasma membrane, plastid | 91.53 | 90.56 |
| CDY59102 | Canola | cytosol, mitochondrion, plastid | 67.89 | 67.65 |
| CDY54791 | Canola | mitochondrion, nucleus, plastid | 67.59 | 67.36 |
| VIT_03s0038g04090.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 64.28 | 63.75 |
| Solyc01g112350.2.1 | Tomato | extracellular, golgi, plasma membrane | 51.72 | 63.63 |
| KRH13998 | Soybean | plastid | 64.45 | 63.48 |
| KRH74111 | Soybean | plastid | 64.45 | 63.22 |
| GSMUA_Achr8P34520_001 | Banana | cytosol | 7.76 | 58.74 |
| KXG29692 | Sorghum | plastid | 57.11 | 56.87 |
| Zm00001d053688_P002 | Maize | plastid | 56.87 | 56.7 |
| TraesCS6A01G168000.1 | Wheat | plastid | 56.04 | 56.24 |
| TraesCS6D01G157000.1 | Wheat | plastid | 55.86 | 56.06 |
| TraesCS6B01G195700.1 | Wheat | plastid | 55.81 | 56.0 |
| HORVU6Hr1G034130.6 | Barley | plastid | 55.86 | 55.93 |
| GSMUA_Achr1P09290_001 | Banana | mitochondrion | 54.98 | 55.77 |
| HORVU7Hr1G093440.3 | Barley | plastid | 54.86 | 54.96 |
| TraesCS7D01G392600.1 | Wheat | cytosol, plasma membrane, plastid | 54.8 | 54.77 |
| TraesCS7A01G398300.1 | Wheat | cytosol, plastid | 54.62 | 54.52 |
| OQU76719 | Sorghum | plastid | 53.2 | 53.97 |
| Zm00001d046717_P009 | Maize | plastid | 54.21 | 53.32 |
| TraesCS7B01G299100.1 | Wheat | cytosol | 53.32 | 53.19 |
| Os06t0622800-01 | Rice | plasma membrane | 19.19 | 47.58 |
| Solyc01g112340.2.1 | Tomato | plastid | 11.67 | 47.13 |
| CDX89082 | Canola | cytosol | 47.93 | 45.73 |
| CDY38039 | Canola | cytosol | 47.39 | 45.64 |
| CDY51011 | Canola | cytosol | 47.45 | 45.28 |
| CDY44841 | Canola | cytosol | 31.22 | 30.46 |
| CDY30954 | Canola | extracellular, golgi | 13.68 | 27.73 |
| CDX74452 | Canola | cytosol | 17.77 | 20.94 |
| CDX98140 | Canola | cytosol | 17.95 | 20.93 |
| CDY36422 | Canola | cytosol | 17.95 | 20.91 |
| CDY30249 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 17.42 | 20.9 |
| CDX92516 | Canola | cytosol | 15.64 | 19.23 |
| CDY58967 | Canola | cytosol | 15.58 | 19.16 |
| CDX67432 | Canola | plastid | 17.06 | 17.52 |
| CDY30953 | Canola | cytosol | 1.95 | 16.84 |
| CDY69502 | Canola | cytosol | 2.37 | 15.09 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.2 | GO:A0A078BWE8 | InterPro:ARM-type_fold | EnsemblPlants:CDX69135 |
| ProteinID:CDX69135 | ProteinID:CDX69135.1 | InterPro:DCB_dom | GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0032012 |
| EnsemblPlantsGene:GSBRNA2T00130922001 | InterPro:IPR000904 | InterPro:IPR023394 | PFAM:PF01369 | PFAM:PF09324 | PFAM:PF12783 |
| PFAM:PF16213 | PFscan:PS50190 | PANTHER:PTHR10663 | PANTHER:PTHR10663:SF108 | SMART:SM00222 | SUPFAM:SSF48371 |
| SUPFAM:SSF48425 | InterPro:Sec7_C | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf |
| UniParc:UPI0004EDC8C5 | SEG:seg | : | : | : | : |
Description
BnaC01g03180D
Coordinates
chrLK031789:+:3114423..3121042
Molecular Weight (calculated)
187806.0 Da
IEP (calculated)
5.635
GRAVY (calculated)
-0.032
Length
1688 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTSQTLGGA TRCGRVIGPS LDKIIKNAAW RKHTYLVSSC KSVLDKLESL PDDFHDPSSA VAGLSSPDAD AVLQPFLFSL DTAYSKVVEP ALDCAFKLFS
0101: LSVIRGEIQS SKQDSVLFKL VNAVSKVGAM AEEPIQLAVL RVLLAAVRSP CVLIRGDCLL HVVKTCYNIY LGGLSGTTQI CAKSVLAQMM LVIFTRSEED
0201: SLADVAVKTV YVNELLAFTD KSVNEGSSVY FCQGFVNEVM AAGQGSPLPP PDVIQILLQN PETETVMTPD SPSFRGYEKN GEADSLTGDM SKMRQDAFLL
0301: FKNLCKLSMR FSSQEKNDDQ IMVRGKTLSL ELLKVIIDNG GPVWRFISAV KQYLCLSLLK NSAVSIMSIF QLQCAIFMSL LSKLRSVLKA EIGIFFPMIV
0401: LRVLENVLQP SFLQKMTVLN LLEKMSQDPQ LIVDIFVNYD CDVDSSNILE RIVNGLLKTA LGPPTGSSTT LSPAQDSTFR NESVKILVNV VKAMGSWMDQ
0501: QLKVDETVWP KGSQIYASMD SNASQIGEED CDTQPDTNPE AYDASMLEQR RAYKIELQKG ISLFNRKPSK GIEFLISSKK IGNSPEEVAS FLMKTAGLNG
0601: TVIGDYLGER EELPLKVMHA YVDSFNFQGK DFVEAIRFFL RGFRLPGEAQ KIDRIMEKFA EHYWKCNPGS FTSADTAYVL AYSVIMLNTD AHNNMVKDKM
0701: SKADFVRNNR GIDDGKDLPE EYLGSLYDRV VKDEIKMNSD TLAPQSKQVN GLNKLLGLDS ILNLVSWMQP DEKAHGANRV LIRDIQEQFQ AKSEKSESAY
0801: HSVTDVSILR FILEVSWGPM LAAFSVTLDQ SDDRLATSLC LQGFRYAVHV TAVMGMQTQR DAFVTSMAKF TNLHCAADMK QKNVDAVKAI ITIAIEDGNH
0901: LQGSWEHILT CLSRIEHLQL LGEGSSPADT RYIPTTKAEV DEKKALGFPH LKKRGALQNP SVMAVVRGGS YDSTSLVKTV PKLVTPEQIK NFIANLNLLD
1001: QIGNFELNHV YANSQRLNSE AIVAFVKALC KVSMSELQSP ADPRVFSLTK LVETAHYNMN RIRLVWSRIW NVLSDFFVSV GLSENLSVAI FVMDSLRQLS
1101: MKFLEREELA NYHFQHEFLR PFVVVMQNSS SAEIRELIVR CVSQMVLSRV SNVQSGWKSV FTVFTTAAID ERKNIVLLAF ETIEKIVRDH FHCITETEIS
1201: VYADCIRCLI TFTNSKFEGD IGFNTIEFLR FCAVKLAEGG LFLNEKLKND NISALKEDSS DGQSVTDLDE QVSYWVPLLS GLSKQASDPR PAIRKRSIEV
1301: LFNILMDHGH LFTRPFWAAI FSSIILPVFN NMQSSSGDSP SSASLDTEET TWDAETSTLA LQLLVDLLAN FFSSVRSQLS SVVSIILGFI KSPVQGSTGS
1401: GISVLLRLAD GLARSASEDE WTEVFLALKE AASLTFAGFM KVLRTMDDIE DVETSSGQSV DKDDLDDDNL HIMSYVVSRT KKHIDVLSQI VEVVSELYRR
1501: NQYSLPASHV DILADIFSCI ASHAQQLNTD TVLRRKFKRA CSVQNLTQPQ LLNFENEANK SYMTFLQDMV TCNPDVSKEL ELESRLVTEC SKVVKIYLNC
1601: TGQHQQQTKP IHWILPMEFD RTEEAKARTS LLVSSLEALC SLEAESLKRH VSSVFPLLVD LVKTEHCSPQ VPYALSNVLK SCIGPILG
0101: LSVIRGEIQS SKQDSVLFKL VNAVSKVGAM AEEPIQLAVL RVLLAAVRSP CVLIRGDCLL HVVKTCYNIY LGGLSGTTQI CAKSVLAQMM LVIFTRSEED
0201: SLADVAVKTV YVNELLAFTD KSVNEGSSVY FCQGFVNEVM AAGQGSPLPP PDVIQILLQN PETETVMTPD SPSFRGYEKN GEADSLTGDM SKMRQDAFLL
0301: FKNLCKLSMR FSSQEKNDDQ IMVRGKTLSL ELLKVIIDNG GPVWRFISAV KQYLCLSLLK NSAVSIMSIF QLQCAIFMSL LSKLRSVLKA EIGIFFPMIV
0401: LRVLENVLQP SFLQKMTVLN LLEKMSQDPQ LIVDIFVNYD CDVDSSNILE RIVNGLLKTA LGPPTGSSTT LSPAQDSTFR NESVKILVNV VKAMGSWMDQ
0501: QLKVDETVWP KGSQIYASMD SNASQIGEED CDTQPDTNPE AYDASMLEQR RAYKIELQKG ISLFNRKPSK GIEFLISSKK IGNSPEEVAS FLMKTAGLNG
0601: TVIGDYLGER EELPLKVMHA YVDSFNFQGK DFVEAIRFFL RGFRLPGEAQ KIDRIMEKFA EHYWKCNPGS FTSADTAYVL AYSVIMLNTD AHNNMVKDKM
0701: SKADFVRNNR GIDDGKDLPE EYLGSLYDRV VKDEIKMNSD TLAPQSKQVN GLNKLLGLDS ILNLVSWMQP DEKAHGANRV LIRDIQEQFQ AKSEKSESAY
0801: HSVTDVSILR FILEVSWGPM LAAFSVTLDQ SDDRLATSLC LQGFRYAVHV TAVMGMQTQR DAFVTSMAKF TNLHCAADMK QKNVDAVKAI ITIAIEDGNH
0901: LQGSWEHILT CLSRIEHLQL LGEGSSPADT RYIPTTKAEV DEKKALGFPH LKKRGALQNP SVMAVVRGGS YDSTSLVKTV PKLVTPEQIK NFIANLNLLD
1001: QIGNFELNHV YANSQRLNSE AIVAFVKALC KVSMSELQSP ADPRVFSLTK LVETAHYNMN RIRLVWSRIW NVLSDFFVSV GLSENLSVAI FVMDSLRQLS
1101: MKFLEREELA NYHFQHEFLR PFVVVMQNSS SAEIRELIVR CVSQMVLSRV SNVQSGWKSV FTVFTTAAID ERKNIVLLAF ETIEKIVRDH FHCITETEIS
1201: VYADCIRCLI TFTNSKFEGD IGFNTIEFLR FCAVKLAEGG LFLNEKLKND NISALKEDSS DGQSVTDLDE QVSYWVPLLS GLSKQASDPR PAIRKRSIEV
1301: LFNILMDHGH LFTRPFWAAI FSSIILPVFN NMQSSSGDSP SSASLDTEET TWDAETSTLA LQLLVDLLAN FFSSVRSQLS SVVSIILGFI KSPVQGSTGS
1401: GISVLLRLAD GLARSASEDE WTEVFLALKE AASLTFAGFM KVLRTMDDIE DVETSSGQSV DKDDLDDDNL HIMSYVVSRT KKHIDVLSQI VEVVSELYRR
1501: NQYSLPASHV DILADIFSCI ASHAQQLNTD TVLRRKFKRA CSVQNLTQPQ LLNFENEANK SYMTFLQDMV TCNPDVSKEL ELESRLVTEC SKVVKIYLNC
1601: TGQHQQQTKP IHWILPMEFD RTEEAKARTS LLVSSLEALC SLEAESLKRH VSSVFPLLVD LVKTEHCSPQ VPYALSNVLK SCIGPILG
0001: MSTSQTLGGA TRCGRIIGPS LDKIIKNAAW RKHTYLVSSC KSVLDKLESL PDDFHDPSSV VSGLAASDAD SVLQPFLLSL ETAYSKVVEP SLDCAFKLFS
0101: LSILRGEIQS SKQDSILFKL VNAVSKVGAI AEEPIQLAVL RVLLAAVRSP CILIRGDCLL HVVKTCYNIY LGGLSGTTQI CAKSVLAQMM LVIFTRSEED
0201: SLDVSVKTIY VNELLTFTDK SVNEGSSVYF CQGFVNEVMA AGQGSPLPPP DVIQILLQNP ETETVMTPDS PSFRGYVANG EGDSETGDMS KVRQDAFLLF
0301: KNLCKLSMRF SSKENNDDQI MVRGKTLSLE LLKVIIDNGG SVWRTNESFI NAVKQYLCLS LLKNSAVSIM SIFQLQCAIF MSLLSKLRSV LKAEIGIFFP
0401: MIVLRVLENV LQPSYLQKMT VLNLLDKMSQ DPQLMVDIFV NYDCDVESSN ILERIVNGLL KTALGPPTGS STTLSPAQDS TFRNDSVKCL VNLAKAMGNW
0501: MDQQLKVNET VWPKGSQVYA SMDSNASQIS ELEGTISDCD SQPDTSNPEA YDASMLEQRR AYKIELQKGI SLFNRKPSKG VEFLISTKKI GSSPEEVASF
0601: LMKTAGLNGT VIGDYLGERD ELPLKVMHAY VDSFNFEKKD FVEAIRFFLR GFRLPGEAQK IDRIMEKFAE HYWKCNPGSF TSADTAYVLA YSVIMLNTDA
0701: HNNMVKDKMT KADFVRNNRG IDDGKDLPEE YLGSLYDRVV KEEIRMNSDT LAPQNKQVNG LNKLLGLDGI LNLVSWMQPD EKPHGANGRL IRDIQEQFQA
0801: KPEKSESVYH TVTDISILRF ILEVSWGPML AAFSVTIDQS DDRLATSLCL QGFRYAVHVT AVMGMQTQRD AFVTSMAKFT NLHCAADMKQ KNVDAVKAII
0901: TIAIEDGNHL HGSWEHILTC LSRIEHLQLL GEVSPSEKRY VPTKKAEVDD KKALGFPNLK KRGSFQNPSV MAVVRGGSYD STSLVKSVPK LVTPEQIKSF
1001: IANLNLLDQI GNFELNHVYA NSQRLNSEAI VSFVKALCKV SMSELQSPTD PRVFSLTKLV ETAHYNMNRI RLVWSRIWNV LSDFFVSVGL SENLSVAIFV
1101: MDSLRQLSMK FLEREELANY HFQHEFLRPF VVVMQKSSSA EIRELIVRCV SQMVLSRVSN VKSGWKNVFT VFTTAALDER KNIVLLAFET IEKIVRDHFH
1201: CIIETEITVY ADCIRCLITF TNSKFEGDIG FNTIEFLRFC ALKLEEGGLV LNEKLKNNTI SALKEDFSDT QSFTDLDEQV SYWIPLLTGL CKQVSDPRPA
1301: IRKRSIEVLF HILMDHGHLF TRPFWTGIFS SIILPVFNNI RSKTDMLFEE SVDSPSSASL DTEETTWDVE TSTLALQLLV DLLVKFFRSV RSQLPSVVSI
1401: IVGFIKSPFQ GSTGSGISVL LHLADGLARS ASEDEWREIF LALKEAASLT FAGFMKVLRT MDDIEDVETL SGQSVNIGDL DDDSLHIMSY VVSRTKKHID
1501: VLSQIVEVVS DLYRRNQFSL SASHVDILAD IFSCIASHAQ QLNTDTVLRR KFKRACSVQN LTEPQLLNFE NEAYKSYMMF LQDMVTCNPN VSKELDLESR
1601: LVTECAKIVK IYLKCTDPQQ QEQQQRKPVL WVLPMESDRV EEATARTSLL VSSLEALCSL EAESLKKHVS SFFPLLVDLV RTEHCSPQVP YVLSNVLKSC
1701: IGPILA
0101: LSILRGEIQS SKQDSILFKL VNAVSKVGAI AEEPIQLAVL RVLLAAVRSP CILIRGDCLL HVVKTCYNIY LGGLSGTTQI CAKSVLAQMM LVIFTRSEED
0201: SLDVSVKTIY VNELLTFTDK SVNEGSSVYF CQGFVNEVMA AGQGSPLPPP DVIQILLQNP ETETVMTPDS PSFRGYVANG EGDSETGDMS KVRQDAFLLF
0301: KNLCKLSMRF SSKENNDDQI MVRGKTLSLE LLKVIIDNGG SVWRTNESFI NAVKQYLCLS LLKNSAVSIM SIFQLQCAIF MSLLSKLRSV LKAEIGIFFP
0401: MIVLRVLENV LQPSYLQKMT VLNLLDKMSQ DPQLMVDIFV NYDCDVESSN ILERIVNGLL KTALGPPTGS STTLSPAQDS TFRNDSVKCL VNLAKAMGNW
0501: MDQQLKVNET VWPKGSQVYA SMDSNASQIS ELEGTISDCD SQPDTSNPEA YDASMLEQRR AYKIELQKGI SLFNRKPSKG VEFLISTKKI GSSPEEVASF
0601: LMKTAGLNGT VIGDYLGERD ELPLKVMHAY VDSFNFEKKD FVEAIRFFLR GFRLPGEAQK IDRIMEKFAE HYWKCNPGSF TSADTAYVLA YSVIMLNTDA
0701: HNNMVKDKMT KADFVRNNRG IDDGKDLPEE YLGSLYDRVV KEEIRMNSDT LAPQNKQVNG LNKLLGLDGI LNLVSWMQPD EKPHGANGRL IRDIQEQFQA
0801: KPEKSESVYH TVTDISILRF ILEVSWGPML AAFSVTIDQS DDRLATSLCL QGFRYAVHVT AVMGMQTQRD AFVTSMAKFT NLHCAADMKQ KNVDAVKAII
0901: TIAIEDGNHL HGSWEHILTC LSRIEHLQLL GEVSPSEKRY VPTKKAEVDD KKALGFPNLK KRGSFQNPSV MAVVRGGSYD STSLVKSVPK LVTPEQIKSF
1001: IANLNLLDQI GNFELNHVYA NSQRLNSEAI VSFVKALCKV SMSELQSPTD PRVFSLTKLV ETAHYNMNRI RLVWSRIWNV LSDFFVSVGL SENLSVAIFV
1101: MDSLRQLSMK FLEREELANY HFQHEFLRPF VVVMQKSSSA EIRELIVRCV SQMVLSRVSN VKSGWKNVFT VFTTAALDER KNIVLLAFET IEKIVRDHFH
1201: CIIETEITVY ADCIRCLITF TNSKFEGDIG FNTIEFLRFC ALKLEEGGLV LNEKLKNNTI SALKEDFSDT QSFTDLDEQV SYWIPLLTGL CKQVSDPRPA
1301: IRKRSIEVLF HILMDHGHLF TRPFWTGIFS SIILPVFNNI RSKTDMLFEE SVDSPSSASL DTEETTWDVE TSTLALQLLV DLLVKFFRSV RSQLPSVVSI
1401: IVGFIKSPFQ GSTGSGISVL LHLADGLARS ASEDEWREIF LALKEAASLT FAGFMKVLRT MDDIEDVETL SGQSVNIGDL DDDSLHIMSY VVSRTKKHID
1501: VLSQIVEVVS DLYRRNQFSL SASHVDILAD IFSCIASHAQ QLNTDTVLRR KFKRACSVQN LTEPQLLNFE NEAYKSYMMF LQDMVTCNPN VSKELDLESR
1601: LVTECAKIVK IYLKCTDPQQ QEQQQRKPVL WVLPMESDRV EEATARTSLL VSSLEALCSL EAESLKKHVS SFFPLLVDLV RTEHCSPQVP YVLSNVLKSC
1701: IGPILA
Arabidopsis Description
BIG4Brefeldin A-inhibited guanine nucleotide-exchange protein 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JN05]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.