CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046491_P001	Maize	cytosol, peroxisome, plastid	95.09	95.64
Zm00001d046490_P001	Maize	cytosol, peroxisome, plastid	90.17	87.64
Os06t0602900-01	Rice	cytosol	80.06	80.99
TraesCS7B01G252600.1	Wheat	cytosol	77.75	78.66
TraesCS7A01G374800.1	Wheat	cytosol	76.88	77.78
HORVU7Hr1G083970.1	Barley	cytosol	76.59	77.49
TraesCS7D01G348600.1	Wheat	cytosol	77.75	63.15
GSMUA_Achr7P10120_001	Banana	cytosol	59.83	59.31
VIT_11s0016g05230.t01	Wine grape	cytosol	57.8	57.8
VIT_11s0052g00410.t01	Wine grape	cytosol	56.36	56.2
VIT_11s0052g00420.t01	Wine grape	cytosol	54.91	55.72
KRH54972	Soybean	cytosol	55.2	55.2
PGSC0003DMT400088882	Potato	cytosol, nucleus, peroxisome	54.91	54.44
Solyc09g091700.2.1	Tomato	cytosol, nucleus, peroxisome	46.53	51.6
KXG23283	Sorghum	cytosol	38.44	47.33
EES08221	Sorghum	cytosol	46.24	45.45
KXG28081	Sorghum	peroxisome	46.53	45.35
OQU83135	Sorghum	cytosol	45.66	44.89
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	45.95	44.17
EES16901	Sorghum	cytosol	43.35	42.49
GSMUA_Achr7P10110_001	Banana	cytosol	58.38	29.49
EES01886	Sorghum	extracellular	47.11	24.73
OQU87352	Sorghum	cytosol	8.38	16.48
EER96863	Sorghum	peroxisome	27.75	15.14
OQU89618	Sorghum	peroxisome	26.88	14.51

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EntrezGene:8065065	InterPro:ADH_C	UniProt:C5Z5M2
EnsemblPlants:EER90008	ProteinID:EER90008	ProteinID:EER90008.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF12	SMART:SM00829	EnsemblPlantsGene:SORBI_3010G184500
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001A89974	RefSeq:XP_002438641.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:52417567..52419874

Molecular Weight (calculated)

37113.2 Da

IEP (calculated)

4.898

GRAVY (calculated)

0.079

Length

346 amino acids

Sequence
(BLAST)

001: MEVVNRYVAT RHHIEGAPTE ADFEVVEETA RWAPDSGEVL VRNMYLSIDP YQLNRMKRSS ASHGAVDGIL PGQRIAAYAA GEVVASACEE YAAGDVVAGV
101: LGWEDYTLFK PSPAVLMSKV AVAADADAGF PLSHHISVLG TSGMTAYGGL FEVGKPVKGE KVFVSAASGS VGSLVGQFAK IAGCYVVGCA GTQAKVDLLR
201: DKLGFDDAFN YKEEPDLKSA LKRYFPDGID VYFENVGGEM LEAALANMNT YGRVALSGVI AEYTGGGRRA VPDLLDVIYK RITIRGFFAW DFLPRFAEFN
301: AVIGEWIRDG KVQVVEDVSD GLESVPSAFA ALFRGQNVGK KLVKLA

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.