Factsheet for VIT_11s0052g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g00420.t01	Wine grape	cytosol	93.37	95.01
VIT_11s0016g05230.t01	Wine grape	cytosol	76.37	76.59
KRH54972	Soybean	cytosol	65.13	65.32
GSMUA_Achr7P10120_001	Banana	cytosol	64.84	64.47
PGSC0003DMT400088882	Potato	cytosol, nucleus, peroxisome	63.98	63.61
Solyc09g091700.2.1	Tomato	cytosol, nucleus, peroxisome	55.91	62.18
Zm00001d046491_P001	Maize	cytosol, peroxisome, plastid	57.93	58.43
HORVU7Hr1G083970.1	Barley	cytosol	56.48	57.31
TraesCS7B01G252600.1	Wheat	cytosol	56.48	57.31
TraesCS7A01G374800.1	Wheat	cytosol	56.2	57.02
Zm00001d046490_P001	Maize	cytosol, peroxisome, plastid	58.21	56.74
Os06t0602900-01	Rice	cytosol	55.62	56.43
EER90008	Sorghum	cytosol	56.2	56.36
VIT_05s0094g01130.t01	Wine grape	cytosol	50.14	50.88
VIT_05s0094g01160.t01	Wine grape	cytosol	50.14	50.43
VIT_05s0094g01120.t01	Wine grape	cytosol	49.57	49.86
VIT_05s0094g01140.t01	Wine grape	cytosol	48.99	49.71
VIT_00s0220g00130.t01	Wine grape	cytosol	49.28	49.42
VIT_05s0094g01230.t01	Wine grape	cytosol	38.9	48.91
VIT_05s0094g01150.t01	Wine grape	cytosol	48.41	48.84
VIT_05s0094g01260.t01	Wine grape	cytosol	46.69	47.37
VIT_05s0094g01250.t01	Wine grape	cytosol	37.75	46.95
TraesCS7D01G348600.1	Wheat	cytosol	57.06	46.48
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	36.6	35.18
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	36.02	34.63
GSMUA_Achr7P10110_001	Banana	cytosol	65.13	32.99
VIT_03s0063g00610.t01	Wine grape	peroxisome	27.09	14.83
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	4.32	11.36

Protein Annotations

EntrezGene:100249583	wikigene:100249583	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C
ProteinID:CBI17880	ProteinID:CBI17880.3	UniProt:D7SQE9	EMBL:FN594964	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100249583
wikigene:LOC100249583	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205
PANTHER:PTHR43205:SF12	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000198434E	ArrayExpress:VIT_11s0052g00410
EnsemblPlantsGene:VIT_11s0052g00410	EnsemblPlants:VIT_11s0052g00410.t01	unigene:Vvi.1190	RefSeq:XP_002265626	RefSeq:XP_002265626.1	:

Description

No Description!

Coordinates

chr11:-:17753708..17757366

Molecular Weight (calculated)

37728.5 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.044

Length

347 amino acids

Sequence
(BLAST)

001: MEVTNKYVTV KTHIDGSSPQ ESDFELKTAA LHLSVEPGSK DVIVKNLYVS IDPYQINRMK RVCSSQKLVS TADGITPGQA ISANGIGRVM ASGNPEFEKD
101: DLVVGLINWE EYTIVKGGNT FRKLDPMGFP LSYHLGVLGL SGLTAYGGFF EVCKPKKGEK VFVSAACGSV GNLVGQYAKL FGCHVVGCAG TKQKVELLKG
201: KLGFDDAFNY KEEADLKSTL KRYFPDGIDI YFDNVGGKML EASVANMNPF GRIAVCGIIS EYTGIGERVA PDMIDIVYKR LKVQGFLVID YLKGMDDFIS
301: TMSNHLSTDK IHVLEDISQG VESIPSAFVG LFRGDNVGKK VVKVADE

Best Arabidopsis Sequence Match ( AT3G59845.1 )
(BLAST)

001: METTVKNKQV ILRNYVKGIP KESDLMIITA SDPVELKVKP GSAAVMVRNL YLSCDPYMGI LMREPTPSTL ALLDAFIPGK PIAGIGVSQV IDSDDPSFTK
101: GDMIWGIVNW EEFSTINPAA IFKIDVNINV PLSYYTGILG MIGLTAYAGF FEICSPKKGD TVFVSAASGA VGQLVGQFAK LMGCYVVGSA GSKQKVDLLL
201: NKFGYDDAFN YKEEPDLDSA LKRCVPKGID IYFENVGGKM LDAVLLNMKT YGRIAVCGMI SQYHLETRDR LQNLPDIIFK KIRMQGFASY DFIDRFPKFL
301: EFVLPYIKEE KLAYVEDIVE GLENGPAALV GLLHGKNVGK QVLKVA

Arabidopsis Description

Allyl alcohol dehydrogenase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8LPM0]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.