Factsheet for VIT_05s0094g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g01140.t01	Wine grape	cytosol	86.55	86.55
VIT_05s0094g01160.t01	Wine grape	cytosol	86.84	86.09
VIT_05s0094g01120.t01	Wine grape	cytosol	79.82	79.13
VIT_05s0094g01150.t01	Wine grape	cytosol	77.78	77.33
GSMUA_Achr5P17110_001	Banana	cytosol	53.22	75.21
VIT_05s0094g01260.t01	Wine grape	cytosol	73.39	73.39
VIT_05s0094g01250.t01	Wine grape	cytosol	59.65	73.12
VIT_05s0094g01230.t01	Wine grape	cytosol	56.43	69.93
GSMUA_Achr6P06920_001	Banana	cytosol	68.42	67.44
TraesCS5A01G303300.1	Wheat	cytosol	54.09	64.91
Os04t0497000-01	Rice	cytosol	64.62	64.06
TraesCS5D01G310600.1	Wheat	cytosol	64.62	63.69
TraesCS5A01G303400.1	Wheat	cytosol	64.33	63.58
TraesCS5D01G310500.1	Wheat	cytosol	63.74	63.56
Zm00001d023990_P001	Maize	cytosol	63.74	63.19
VIT_00s0220g00130.t01	Wine grape	cytosol	63.74	63.01
TraesCS5B01G303800.1	Wheat	cytosol	62.87	62.68
Os12t0226900-01	Rice	cytosol	63.16	62.43
TraesCS2A01G070000.1	Wheat	cytosol	63.16	62.43
TraesCS2D01G068900.1	Wheat	cytosol	63.16	62.43
Os12t0226700-01	Rice	plasma membrane	62.87	62.14
Os12t0227400-01	Rice	cytosol	62.57	61.85
TraesCS2B01G083600.2	Wheat	cytosol	62.57	61.67
TraesCS2B01G083300.1	Wheat	cytosol	61.99	61.45
EES16901	Sorghum	cytosol	63.16	61.19
Os12t0225900-01	Rice	cytosol, mitochondrion	61.7	61.16
TraesCS2D01G068700.1	Wheat	cytosol	61.99	61.1
TraesCS5B01G097900.1	Wheat	cytosol	61.11	60.23
TraesCS2A01G069900.1	Wheat	peroxisome	60.23	59.88
KXG28081	Sorghum	peroxisome	61.99	59.72
TraesCS5D01G103800.1	Wheat	cytosol	60.23	59.37
OQU83135	Sorghum	cytosol	60.82	59.09
KXG23283	Sorghum	cytosol	48.54	59.07
Zm00001d007285_P002	Maize	peroxisome	61.11	59.04
EES08221	Sorghum	cytosol	60.53	58.81
Os12t0226400-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	59.65	58.62
Zm00001d049031_P001	Maize	peroxisome	42.4	58.0
Zm00001d049032_P001	Maize	cytosol	59.94	57.1
TraesCS5A01G091700.1	Wheat	cytosol	57.31	56.81
TraesCS4A01G229900.1	Wheat	cytosol	57.02	55.56
Os11t0255500-01	Rice	cytosol	57.89	55.15
TraesCS4B01G086100.1	Wheat	cytosol	57.89	55.15
TraesCS5B01G303700.1	Wheat	golgi	64.33	53.92
VIT_11s0052g00420.t01	Wine grape	cytosol	50.0	50.15
VIT_11s0052g00410.t01	Wine grape	cytosol	50.88	50.14
VIT_11s0016g05230.t01	Wine grape	cytosol	49.71	49.13
GSMUA_Achr5P17100_001	Banana	cytosol	13.45	42.99
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	42.69	40.44
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	41.81	39.61
KRH49605	Soybean	cytosol	11.99	35.04
VIT_03s0063g00610.t01	Wine grape	peroxisome	30.41	16.4
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	5.26	13.64

Protein Annotations

EntrezGene:100250942	wikigene:100250942	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C
EMBL:AM462739	ProteinID:CAN61472	ProteinID:CAN61472.1	ProteinID:CBI24731	ProteinID:CBI24731.3	UniProt:D7T2K0
EMBL:FN595507	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100250942	wikigene:LOC100250942	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI00015CB852	ArrayExpress:VIT_05s0094g01130	EnsemblPlantsGene:VIT_05s0094g01130	EnsemblPlants:VIT_05s0094g01130.t01	RefSeq:XP_002279426
RefSeq:XP_002279426.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:24463204..24466109

Molecular Weight (calculated)

37893.0 Da

IEP (calculated)

5.774

GRAVY (calculated)

0.061

Length

342 amino acids

Sequence
(BLAST)

001: MAEVSNKQVI FKDYISGFPT DADMYITTST ISLKVPEGSK AVLVKNLYLS CDPYMRPRMT YTTDSYVDSF KPGSVIEGYG VAKVLDSGHP NFSKGDLVWG
101: FTNWEEYSLI TSTEMLIKIP TTDVPLSYYT GILGMPGLTA YAGFYEICTP KKGEYVYVSA ASGAVGQLVG QFAKLLGCYV VGSAGSKEKV DLLKNKFGFD
201: EAFNYKEETD LVACLKRYFP EGIDIYFDNV GGKMLDAVLL NMRVHGRIAA CGMISQYNLD KLEGVCNLIN IIIKQVRMQG FVITSYYHLY PKYLEMVLPH
301: IKEGKIVYVE DTVEGLESAP QALIGLFSGR NVGKQVVVVA RE

Best Arabidopsis Sequence Match ( AT5G16990.1 )
(BLAST)

001: MTTNKQVIFK DHVSGFPKES DFNFTTTTVE LRVPEGSKSV LVKNLYLSCD PYMRSRMGKP DPSSALAQAY APGKPIYGYG VSRVIESGHP DYKKGDLLWG
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE

Arabidopsis Description

P2NADP-dependent alkenal double bond reductase P2 [Source:UniProtKB/Swiss-Prot;Acc:Q39173]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.