Factsheet for TraesCS4A01G229900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G086100.1	Wheat	cytosol	93.16	91.09
EES08221	Sorghum	cytosol	73.5	73.3
OQU83135	Sorghum	cytosol	73.22	73.01
Zm00001d049032_P001	Maize	cytosol	73.22	71.59
KXG28081	Sorghum	peroxisome	71.79	70.99
Zm00001d007285_P002	Maize	peroxisome	71.23	70.62
Zm00001d049031_P001	Maize	peroxisome	49.86	70.0
Os11t0255500-01	Rice	cytosol	70.94	69.36
TraesCS5A01G303300.1	Wheat	cytosol	51.85	63.86
TraesCS2A01G070000.1	Wheat	cytosol	62.68	63.58
TraesCS5A01G303400.1	Wheat	cytosol	62.11	63.01
TraesCS2A01G069900.1	Wheat	peroxisome	60.97	62.21
TraesCS5A01G091700.1	Wheat	cytosol	59.26	60.29
GSMUA_Achr5P17110_001	Banana	cytosol	41.31	59.92
VIT_05s0094g01130.t01	Wine grape	cytosol	55.56	57.02
VIT_05s0094g01120.t01	Wine grape	cytosol	55.56	56.52
Solyc01g080030.1.1	Tomato	cytosol	42.73	56.18
Solyc12g096760.1.1	Tomato	extracellular	54.7	55.98
Solyc12g010960.1.1	Tomato	cytosol	23.93	55.63
Solyc06g063040.1.1	Tomato	extracellular, plastid	54.13	55.39
VIT_05s0094g01160.t01	Wine grape	cytosol	54.42	55.36
Bra032019.1-P	Field mustard	cytosol	52.99	55.36
VIT_05s0094g01140.t01	Wine grape	cytosol	53.56	54.97
AT5G16990.1	Thale cress	cytosol	53.56	54.81
CDY43153	Canola	cytosol	53.56	54.65
AT5G16970.1	Thale cress	cytosol	53.28	54.2
Bra008581.1-P	Field mustard	cytosol	52.99	54.07
CDX69408	Canola	cytosol	52.99	54.07
CDY28735	Canola	cytosol	52.99	53.91
VIT_05s0094g01150.t01	Wine grape	cytosol	52.71	53.78
CDY16966	Canola	cytosol	53.56	53.56
CDY38077	Canola	cytosol	53.28	53.43
VIT_05s0094g01230.t01	Wine grape	cytosol	41.88	53.26
Solyc12g010950.1.1	Tomato	cytosol	52.42	53.18
AT5G16960.2	Thale cress	cytosol	52.42	53.18
AT3G03080.1	Thale cress	cytosol	52.99	53.14
AT5G17000.1	Thale cress	cytosol	52.14	53.04
CDX85479	Canola	cytosol	52.71	52.86
TraesCS3A01G401400.1	Wheat	cytosol	52.99	52.84
Solyc03g007200.1.1	Tomato	cytosol	47.01	52.72
CDX78721	Canola	cytosol	53.28	52.68
VIT_05s0094g01250.t01	Wine grape	cytosol	41.6	52.33
Bra023591.1-P	Field mustard	cytosol	52.14	52.29
AT5G37980.1	Thale cress	plastid	52.42	52.12
VIT_05s0094g01260.t01	Wine grape	cytosol	50.71	52.05
AT1G26320.1	Thale cress	cytosol	51.28	51.28
AT5G16980.2	Thale cress	cytosol	44.44	51.15
CDY16150	Canola	cytosol	51.0	51.0
Bra024723.1-P	Field mustard	cytosol	51.0	51.0
AT5G37940.1	Thale cress	cytosol, peroxisome, plastid	51.28	50.99
CDX85014	Canola	cytosol	50.71	50.71
AT5G38000.1	Thale cress	plastid	50.43	50.14
Solyc12g010970.1.1	Tomato	cytosol	28.49	49.51
TraesCS3A01G087300.1	Wheat	cytosol	49.29	49.01
AT3G59845.1	Thale cress	cytosol, golgi, peroxisome	47.58	48.27
Bra007482.1-P	Field mustard	cytosol	45.87	45.61
CDY05974	Canola	cytosol	45.58	45.33
TraesCS7A01G374800.1	Wheat	cytosol	44.16	45.32
Bra006381.1-P	Field mustard	cytosol	53.28	43.19
CDX70729	Canola	golgi, plastid	53.28	39.53
TraesCS5A01G240300.1	Wheat	nucleus	28.21	15.62
TraesCS5A01G240400.1	Wheat	peroxisome	27.35	15.14

Protein Annotations

EnsemblPlants:TraesCS4A01G229900.1	EnsemblPlantsGene:TraesCS4A01G229900	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:ADH_C	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF1	PFAM:PF00107	PFAM:PF16884
SEG:seg	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	MapMan:50.1.3	:

Description

No Description!

Coordinates

chr4A:-:539147640..539153101

Molecular Weight (calculated)

37873.6 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.022

Length

351 amino acids

Sequence
(BLAST)

001: MAGHGDEVTT NRKVVLRRHV TGYPTAEDME VVVTSDVRLR VPEGPTPAVV VKNLYLSCDP WMRGRMTKHD VGDAVPAEDF VLGEALVNFT VGKVLDSTHP
101: EFDAGDLVRG MSAWEEYTLI TQTEGLFKIN HPELPLSHYT GVLGLAGLTA YAGLFEVGKP KQGESVFVSA ASGAVGQVVG QLAKIAGCYV VGSAGSDEKV
201: NLLKSKMGFD DAFNYKSEGG DLGAALGRRL PGGIDVYFDN VGGATLDVEL LRMRPGGRVV ACGMISRYNL PEHQGVRNLW CTIPKRVRVE GFSCMDYHHL
301: YPRFEEEMAS YIKAGKVTVV EDVVRGIDKA PEALVGLFSG RNVGKLLVAL A

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.