Factsheet for VIT_05s0094g01160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g01130.t01	Wine grape	cytosol	86.09	86.84
VIT_05s0094g01150.t01	Wine grape	cytosol	82.03	82.27
VIT_05s0094g01140.t01	Wine grape	cytosol	80.58	81.29
VIT_05s0094g01120.t01	Wine grape	cytosol	80.29	80.29
GSMUA_Achr5P17110_001	Banana	cytosol	52.17	74.38
VIT_05s0094g01260.t01	Wine grape	cytosol	71.01	71.64
VIT_05s0094g01250.t01	Wine grape	cytosol	57.68	71.33
VIT_05s0094g01230.t01	Wine grape	cytosol	55.94	69.93
GSMUA_Achr6P06920_001	Banana	cytosol	66.38	65.99
Os04t0497000-01	Rice	cytosol	64.64	64.64
TraesCS5A01G303300.1	Wheat	cytosol	53.33	64.56
TraesCS5D01G310600.1	Wheat	cytosol	64.93	64.55
TraesCS5A01G303400.1	Wheat	cytosol	64.35	64.16
TraesCS5D01G310500.1	Wheat	cytosol	63.48	63.85
Zm00001d023990_P001	Maize	cytosol	63.77	63.77
Os12t0226900-01	Rice	cytosol	63.77	63.58
TraesCS5B01G303800.1	Wheat	cytosol	63.19	63.56
Os12t0226700-01	Rice	plasma membrane	63.48	63.29
TraesCS5B01G097900.1	Wheat	cytosol	63.48	63.11
EES16901	Sorghum	cytosol	64.06	62.61
Os12t0227400-01	Rice	cytosol	62.61	62.43
VIT_00s0220g00130.t01	Wine grape	cytosol	62.32	62.14
TraesCS2B01G083300.1	Wheat	cytosol	62.03	62.03
TraesCS5D01G103800.1	Wheat	cytosol	62.32	61.96
TraesCS2D01G068900.1	Wheat	cytosol	61.74	61.56
TraesCS2D01G068700.1	Wheat	cytosol	61.74	61.38
TraesCS2A01G070000.1	Wheat	cytosol	61.45	61.27
Os12t0225900-01	Rice	cytosol, mitochondrion	60.87	60.87
KXG23283	Sorghum	cytosol	49.57	60.85
TraesCS2B01G083600.2	Wheat	cytosol	60.87	60.52
TraesCS2A01G069900.1	Wheat	peroxisome	60.29	60.47
Zm00001d007285_P002	Maize	peroxisome	61.74	60.17
KXG28081	Sorghum	peroxisome	61.74	60.0
TraesCS5A01G091700.1	Wheat	cytosol	59.71	59.71
Os12t0226400-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	60.0	59.48
OQU83135	Sorghum	cytosol	60.29	59.09
EES08221	Sorghum	cytosol	59.71	58.52
Zm00001d049031_P001	Maize	peroxisome	41.74	57.6
Zm00001d049032_P001	Maize	cytosol	58.55	56.27
Os11t0255500-01	Rice	cytosol	57.1	54.87
TraesCS4A01G229900.1	Wheat	cytosol	55.36	54.42
TraesCS4B01G086100.1	Wheat	cytosol	56.23	54.04
TraesCS5B01G303700.1	Wheat	golgi	63.19	53.43
VIT_11s0052g00410.t01	Wine grape	cytosol	50.43	50.14
VIT_11s0052g00420.t01	Wine grape	cytosol	49.28	49.85
VIT_11s0016g05230.t01	Wine grape	cytosol	49.57	49.42
GSMUA_Achr5P17100_001	Banana	cytosol	13.04	42.06
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	40.58	38.78
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	40.29	38.5
KRH49605	Soybean	cytosol	11.88	35.04
VIT_03s0063g00610.t01	Wine grape	peroxisome	31.3	17.03
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	4.93	12.88

Protein Annotations

EntrezGene:100268122	wikigene:100268122	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A5BNR6
InterPro:ADH_C	EMBL:AM465903	ProteinID:CAN68149	ProteinID:CAN68149.1	ProteinID:CCB49415	ProteinID:CCB49415.1
EMBL:FN595507	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100268122
wikigene:LOC100268122	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001521851	ArrayExpress:VIT_05s0094g01160	EnsemblPlantsGene:VIT_05s0094g01160	EnsemblPlants:VIT_05s0094g01160.t01
unigene:Vvi.5562	RefSeq:XP_002279529	RefSeq:XP_002279529.1	:	:	:

Description

No Description!

Coordinates

chr5:-:24477160..24479556

Molecular Weight (calculated)

38072.1 Da

IEP (calculated)

6.521

GRAVY (calculated)

0.014

Length

345 amino acids

Sequence
(BLAST)

001: MADAEEVSNK QVIFRDYVSG FPKESDMYMT TSTISLKVPE GSKAVVVKNL YLSCDPYMRP RMSYTTDSYI HSFKPGSVIS GYGVAKVLDS GHPNFSKGDL
101: VWGFTGWEEY TLITAPESLF KIPNNDVPLS YYIGILGMPG ITAYAGFYEI CSPKKGEYVY VSAASGAVGQ LVGQFAKLIG CYVVGSAGSK EKVDLLKNKF
201: GFDEAFNYKE EQDLVACLKR YFPEGIDIYF ENVGGPMLDA VLANMRVQGR IAACGMISQY NLDKPVGVYN LMNIIKKQIK MQGFVAGSYF HLYPKFLEMI
301: LPHVKEGKVV YVEDIAEGLE SAPQALIGLF SGRNVGKQVV LVARE

Best Arabidopsis Sequence Match ( AT5G16990.1 )
(BLAST)

001: MTTNKQVIFK DHVSGFPKES DFNFTTTTVE LRVPEGSKSV LVKNLYLSCD PYMRSRMGKP DPSSALAQAY APGKPIYGYG VSRVIESGHP DYKKGDLLWG
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE

Arabidopsis Description

P2NADP-dependent alkenal double bond reductase P2 [Source:UniProtKB/Swiss-Prot;Acc:Q39173]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.