Factsheet for VIT_12s0059g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 3
plastid 1
peroxisome 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	81.44	81.44
KRH26780	Soybean	cytosol	63.71	65.71
KRH26779	Soybean	cytosol	63.16	62.98
Solyc07g045090.2.1	Tomato	cytoskeleton, cytosol, peroxisome	58.73	61.63
KRH22573	Soybean	cytoskeleton, cytosol, peroxisome	61.5	60.99
Solyc07g045080.2.1	Tomato	cytoskeleton, cytosol, peroxisome	50.69	60.8
VIT_05s0094g01130.t01	Wine grape	cytosol	39.61	41.81
VIT_05s0094g01120.t01	Wine grape	cytosol	39.89	41.74
VIT_05s0094g01160.t01	Wine grape	cytosol	38.78	40.58
VIT_05s0094g01150.t01	Wine grape	cytosol	38.5	40.41
VIT_05s0094g01140.t01	Wine grape	cytosol	37.95	40.06
VIT_05s0094g01260.t01	Wine grape	cytosol	37.12	39.18
VIT_05s0094g01250.t01	Wine grape	cytosol	29.92	38.71
VIT_05s0094g01230.t01	Wine grape	cytosol	27.98	36.59
VIT_00s0220g00130.t01	Wine grape	cytosol	34.9	36.42
VIT_11s0052g00410.t01	Wine grape	cytosol	34.63	36.02
VIT_11s0052g00420.t01	Wine grape	cytosol	33.8	35.78
VIT_11s0016g05230.t01	Wine grape	cytosol	32.69	34.1
VIT_03s0063g00610.t01	Wine grape	peroxisome	23.82	13.56
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	4.16	11.36

Protein Annotations

EntrezGene:100258580	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	EMBL:AM438248
ProteinID:CAN78402	ProteinID:CAN78402.1	ProteinID:CBI28805	ProteinID:CBI28805.3	UniProt:D7TE82	EMBL:FN595765
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205
PANTHER:PTHR43205:SF6	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00015CA9FE	ArrayExpress:VIT_12s0059g00690
EnsemblPlantsGene:VIT_12s0059g00690	EnsemblPlants:VIT_12s0059g00690.t01	RefSeq:XP_010657204.1	RefSeq:XP_019078780.1	RefSeq:XP_019078781.1	:

Description

No Description!

Coordinates

chr12:+:5523183..5525194

Molecular Weight (calculated)

39554.3 Da

IEP (calculated)

6.000

GRAVY (calculated)

-0.041

Length

361 amino acids

Sequence
(BLAST)

001: MAGLEGVDNG GHENLTMVES REWVMVAYAA KGIPTSDHLK LRTTKLSLDA DSIPKDHVAV ELLWVSVDPY LRGRMSGQDE GLYFSQFALD EVITTCGIGR
101: VIRSKSSKFS KGDLVSTSFF PFSEYFIIEA TSLQVVDQTA GIEISTYLSA LGVPGFAAWV AIEVIGNPKS GSNVFISAAA GGVGMFAGQL AKFKGCRVVG
201: STGTDEKVKL LKEEFGYDEA FNYNKEADFD AALSKYFPNG IDLYLDNVGG KMLEAVLNHV NARARIAVSG MISQYNQVWT EREGVRNLLN IVGKEVRIEG
301: YLMGSHMDRF DDFTKAMVTY TKEGKLRSKH KIYYGIESFI ESLGSIFSSS NIGKVVIQVK P

Best Arabidopsis Sequence Match ( AT1G65560.1 )
(BLAST)

001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE

Arabidopsis Description

Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.