Factsheet for VIT_05s0094g01140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g01130.t01	Wine grape	cytosol	86.55	86.55
VIT_05s0094g01160.t01	Wine grape	cytosol	81.29	80.58
VIT_05s0094g01150.t01	Wine grape	cytosol	76.61	76.16
VIT_05s0094g01120.t01	Wine grape	cytosol	76.32	75.65
GSMUA_Achr5P17110_001	Banana	cytosol	50.88	71.9
VIT_05s0094g01260.t01	Wine grape	cytosol	68.71	68.71
VIT_05s0094g01250.t01	Wine grape	cytosol	55.56	68.1
VIT_05s0094g01230.t01	Wine grape	cytosol	53.51	66.3
GSMUA_Achr6P06920_001	Banana	cytosol	65.2	64.27
Os12t0226900-01	Rice	cytosol	62.57	61.85
TraesCS5D01G310600.1	Wheat	cytosol	62.57	61.67
TraesCS5A01G303300.1	Wheat	cytosol	51.17	61.4
Os12t0227400-01	Rice	cytosol	61.99	61.27
Zm00001d023990_P001	Maize	cytosol	61.7	61.16
TraesCS5B01G097900.1	Wheat	cytosol	61.99	61.1
Os12t0226700-01	Rice	plasma membrane	61.7	60.98
TraesCS5A01G303400.1	Wheat	cytosol	61.7	60.98
TraesCS5D01G310500.1	Wheat	cytosol	61.11	60.93
Os04t0497000-01	Rice	cytosol	61.4	60.87
TraesCS2D01G068900.1	Wheat	cytosol	61.4	60.69
TraesCS5B01G303800.1	Wheat	cytosol	60.82	60.64
TraesCS5D01G103800.1	Wheat	cytosol	61.4	60.52
TraesCS2A01G070000.1	Wheat	cytosol	61.11	60.4
VIT_00s0220g00130.t01	Wine grape	cytosol	60.82	60.12
Os12t0225900-01	Rice	cytosol, mitochondrion	60.23	59.71
TraesCS2B01G083300.1	Wheat	cytosol	60.23	59.71
TraesCS2D01G068700.1	Wheat	cytosol	60.53	59.65
TraesCS2A01G069900.1	Wheat	peroxisome	59.94	59.59
EES16901	Sorghum	cytosol	61.4	59.49
TraesCS2B01G083600.2	Wheat	cytosol	59.94	59.08
OQU83135	Sorghum	cytosol	59.65	57.95
KXG28081	Sorghum	peroxisome	59.94	57.75
KXG23283	Sorghum	cytosol	47.37	57.65
TraesCS5A01G091700.1	Wheat	cytosol	57.89	57.39
EES08221	Sorghum	cytosol	58.77	57.1
Zm00001d007285_P002	Maize	peroxisome	59.06	57.06
Os12t0226400-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	57.89	56.9
Zm00001d049032_P001	Maize	cytosol	58.19	55.43
Zm00001d049031_P001	Maize	peroxisome	40.35	55.2
Os11t0255500-01	Rice	cytosol	56.73	54.04
TraesCS4A01G229900.1	Wheat	cytosol	54.97	53.56
TraesCS4B01G086100.1	Wheat	cytosol	55.85	53.2
TraesCS5B01G303700.1	Wheat	golgi	62.28	52.21
VIT_11s0052g00420.t01	Wine grape	cytosol	49.12	49.27
VIT_11s0052g00410.t01	Wine grape	cytosol	49.71	48.99
VIT_11s0016g05230.t01	Wine grape	cytosol	47.95	47.4
GSMUA_Achr5P17100_001	Banana	cytosol	13.16	42.06
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	40.64	38.5
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	40.06	37.95
KRH49605	Soybean	cytosol	12.28	35.9
VIT_03s0063g00610.t01	Wine grape	peroxisome	29.82	16.09
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	4.97	12.88

Protein Annotations

EntrezGene:100245795	wikigene:100245795	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A5BKL5
InterPro:ADH_C	EMBL:AM462739	ProteinID:CAN61473	ProteinID:CAN61473.1	ProteinID:CBI24732	ProteinID:CBI24732.3
EMBL:FN595507	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100245795	wikigene:LOC100245795	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0001521507	ArrayExpress:VIT_05s0094g01140	EnsemblPlantsGene:VIT_05s0094g01140	EnsemblPlants:VIT_05s0094g01140.t01	RefSeq:XP_002279499
RefSeq:XP_002279499.2	RefSeq:XP_010650734.1	:	:	:	:

Description

No Description!

Coordinates

chr5:-:24468047..24472674

Molecular Weight (calculated)

37890.9 Da

IEP (calculated)

6.051

GRAVY (calculated)

0.006

Length

342 amino acids

Sequence
(BLAST)

001: MAEVSNKQVI FKDYVSGFPT DADMYMTTST MSLKVPEGSQ AVLVKNLYLS CDPYMRARMT YTHTSYIGSF KPGSVLNGFG VAKVLDSGHP NFSKGDLIWG
101: FTGWEEYTLM TSTETLFKIP TTDVPLSYYI GILGMPGMTA YAGFYEICTP KKGEYVYVSS ASGAVGQLVG QFAKLLGCYV VGSAGTKEKV DLLKDKFGFD
201: DAFNYKEEPD LASCLKRYFP EGIDIYFDNV GGEMLDAVLP RMRSHGRIAV CGMISQYNME KPEGLCNLIS IIIKQVKIQG FLVRSYYHLY PKYMEMVLPH
301: IKEGKIVYVE DTVEGLENAP QALIGLFSGA NVGKQVVVVS RE

Best Arabidopsis Sequence Match ( AT5G16990.1 )
(BLAST)

001: MTTNKQVIFK DHVSGFPKES DFNFTTTTVE LRVPEGSKSV LVKNLYLSCD PYMRSRMGKP DPSSALAQAY APGKPIYGYG VSRVIESGHP DYKKGDLLWG
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE

Arabidopsis Description

P2NADP-dependent alkenal double bond reductase P2 [Source:UniProtKB/Swiss-Prot;Acc:Q39173]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.