Factsheet for TraesCS4B01G086100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G229900.1	Wheat	cytosol	91.09	93.16
OQU83135	Sorghum	cytosol	72.42	73.86
EES08221	Sorghum	cytosol	72.14	73.58
Zm00001d049032_P001	Maize	cytosol	73.26	73.26
Zm00001d007285_P002	Maize	peroxisome	71.03	72.03
KXG28081	Sorghum	peroxisome	70.75	71.55
Os11t0255500-01	Rice	cytosol	71.31	71.31
Zm00001d049031_P001	Maize	peroxisome	49.03	70.4
TraesCS5B01G303800.1	Wheat	cytosol	61.0	63.85
TraesCS2B01G083300.1	Wheat	cytosol	61.0	63.48
TraesCS5B01G097900.1	Wheat	cytosol	61.28	63.4
TraesCS2B01G083600.2	Wheat	cytosol	61.0	63.11
GSMUA_Achr5P17110_001	Banana	cytosol	40.39	59.92
VIT_05s0094g01130.t01	Wine grape	cytosol	55.15	57.89
Solyc12g096760.1.1	Tomato	extracellular	55.15	57.73
VIT_05s0094g01120.t01	Wine grape	cytosol	55.43	57.68
Solyc01g080030.1.1	Tomato	cytosol	42.9	57.68
Bra032019.1-P	Field mustard	cytosol	53.48	57.14
CDY43153	Canola	cytosol	54.04	56.4
Solyc12g010960.1.1	Tomato	cytosol	23.68	56.29
VIT_05s0094g01160.t01	Wine grape	cytosol	54.04	56.23
AT5G16990.1	Thale cress	cytosol	53.48	55.98
AT5G16970.1	Thale cress	cytosol	53.76	55.94
VIT_05s0094g01140.t01	Wine grape	cytosol	53.2	55.85
CDY38077	Canola	cytosol	54.32	55.71
Solyc06g063040.1.1	Tomato	extracellular, plastid	53.2	55.69
CDX69408	Canola	cytosol	53.2	55.52
Bra008581.1-P	Field mustard	cytosol	53.2	55.52
AT5G16960.2	Thale cress	cytosol	53.48	55.49
CDY28735	Canola	cytosol	53.2	55.36
AT3G03080.1	Thale cress	cytosol	53.48	54.86
CDX85479	Canola	cytosol	53.48	54.86
AT5G17000.1	Thale cress	cytosol	52.65	54.78
VIT_05s0094g01230.t01	Wine grape	cytosol	42.06	54.71
CDY16966	Canola	cytosol	53.2	54.42
VIT_05s0094g01150.t01	Wine grape	cytosol	52.09	54.36
Bra023591.1-P	Field mustard	cytosol	52.92	54.29
TraesCS5B01G303700.1	Wheat	golgi	61.56	54.17
CDX78721	Canola	cytosol	53.48	54.08
Solyc12g010950.1.1	Tomato	cytosol	52.09	54.05
VIT_05s0094g01260.t01	Wine grape	cytosol	51.25	53.8
Solyc03g007200.1.1	Tomato	cytosol	46.8	53.67
AT5G37980.1	Thale cress	plastid	52.65	53.54
VIT_05s0094g01250.t01	Wine grape	cytosol	41.5	53.41
AT1G26320.1	Thale cress	cytosol	51.53	52.71
TraesCS3B01G434300.1	Wheat	cytosol	51.53	52.56
AT5G16980.2	Thale cress	cytosol	44.57	52.46
AT5G37940.1	Thale cress	cytosol, peroxisome, plastid	51.53	52.41
CDY16150	Canola	cytosol	50.97	52.14
Bra024723.1-P	Field mustard	cytosol	50.97	52.14
CDX85014	Canola	cytosol	50.7	51.85
AT5G38000.1	Thale cress	plastid	50.7	51.56
Solyc12g010970.1.1	Tomato	cytosol	28.69	50.99
AT3G59845.1	Thale cress	cytosol, golgi, peroxisome	48.47	50.29
TraesCS3B01G102600.1	Wheat	cytosol	49.3	50.0
CDY05974	Canola	cytosol	46.52	47.31
Bra007482.1-P	Field mustard	cytosol	46.24	47.03
TraesCS7B01G252600.1	Wheat	cytosol	44.29	46.49
Bra006381.1-P	Field mustard	cytosol	53.48	44.34
CDX70729	Canola	golgi, plastid	53.76	40.8
TraesCS5B01G238400.1	Wheat	peroxisome	28.97	16.4
TraesCS5B01G238500.1	Wheat	peroxisome	28.41	16.09

Protein Annotations

EnsemblPlants:TraesCS4B01G086100.1	EnsemblPlantsGene:TraesCS4B01G086100	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:ADH_C	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF1	PFAM:PF00107	PFAM:PF16884
SEG:seg	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	MapMan:50.1.3	:

Description

No Description!

Coordinates

chr4B:+:86091981..86094494

Molecular Weight (calculated)

38683.4 Da

IEP (calculated)

5.126

GRAVY (calculated)

-0.004

Length

359 amino acids

Sequence
(BLAST)

001: MASPTKLDMA GHGDEVTRNK KVVLRRYVTG YPTAEDMEVV VTSDVRLRVP EGSAAAVVVK NLYLSCDPWM RGRMTKHDDG DAVPAEDFVL GEALVNFTVG
101: EVVDSTHPEF DAGDLVWGMS AWEEYTLITQ TEGLFKINHP ELPLSHYTGV LGLAGLTAYA GLFEVGKPKQ GETVFVSAAS GAVGQVVGQL AKIAGCYVVG
201: SAGSDEKVSL LKSKMGFDDA FNYKSEGDNL GAALGRRLPD GIDVYFDNVG GATLDAALLR MRPGGRVVAC GMISQYNLSE HQGVRNLWCI IPKRVRVEGF
301: SCMDYHHLYP RFEEEMAAYI NAGKVTVAED VVRGIEKAPE ALVGLFSGRN VGKLLVALA

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.