Factsheet for TraesCS3B01G102600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G015680.3	Barley	cytosol, peroxisome	88.7	86.98
Zm00001d008377_P001	Maize	extracellular, mitochondrion	72.03	71.23
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	70.62	69.44
GSMUA_Achr5P17090_001	Banana	cytosol	63.84	65.51
PGSC0003DMT400071464	Potato	cytosol	14.69	62.65
TraesCS5B01G303800.1	Wheat	cytosol	53.39	55.1
TraesCS3B01G434300.1	Wheat	cytosol	54.52	54.83
TraesCS5B01G097900.1	Wheat	cytosol	53.67	54.76
TraesCS2B01G083600.2	Wheat	cytosol	53.11	54.18
TraesCS2B01G083300.1	Wheat	cytosol	52.54	53.91
Solyc11g030720.1.1	Tomato	cytoskeleton, cytosol, peroxisome	48.59	50.0
TraesCS4B01G086100.1	Wheat	cytosol	50.0	49.3
TraesCS5B01G303700.1	Wheat	golgi	54.52	47.3
TraesCS7B01G252600.1	Wheat	cytosol	44.35	45.91
AT5G37960.1	Thale cress	cytosol	10.73	35.19
TraesCS5B01G238400.1	Wheat	peroxisome	26.55	14.83
TraesCS5B01G238500.1	Wheat	peroxisome	25.42	14.2

Protein Annotations

EnsemblPlants:TraesCS3B01G102600.1	EnsemblPlantsGene:TraesCS3B01G102600	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:ADH_C	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF18	PFAM:PF00107	PFAM:PF16884
SEG:seg	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	MapMan:50.1.3	:

Description

No Description!

Coordinates

chr3B:+:69352086..69359818

Molecular Weight (calculated)

38412.3 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.039

Length

354 amino acids

Sequence
(BLAST)

001: MAELKSRRVI LKDYVEGYPT EEHMELLPAA DVDEAAAAEE GSVLVKNLCL SCDPYMRPKM ARPQEQWYTE AYVPGTTITG FGVAQVVRSS LPGLAAGDLV
101: SGVTGWEDYS VIKPPFAGQL TKIRPEDGLP LSYYTGVLGM PGFTAYVGFH RICSPKAGET VFVSAASGAV GQLVGQFARL MGCYVVGSAG SKEKVDLLIN
201: KFGFHDAFNY KEEGGDLTGA LKKRFPDGID VYFENVGGKM LEAVLANMKV HGRIAVCGLI SQYNLTAGEK EADVGVRNLT SLVSKRIRMQ GFIEPDHKHL
301: YPEYMAWVLP HIKEGRVVYV EDVADGLDAA PAALIGLYHG RNVGKQVVRL TAPE

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.