Factsheet for Solyc11g030720.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

plastid 2
peroxisome 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071464	Potato	cytosol	23.84	98.8
Solyc12g010960.1.1	Tomato	cytosol	27.33	62.25
Solyc12g010950.1.1	Tomato	cytosol	61.05	60.69
GSMUA_Achr5P17090_001	Banana	cytosol	59.01	58.84
Solyc12g096760.1.1	Tomato	extracellular	58.14	58.31
Solyc06g063040.1.1	Tomato	extracellular, plastid	56.98	57.14
Solyc06g064670.1.1	Tomato	cytosol	12.79	57.14
Solyc03g007200.1.1	Tomato	cytosol	50.29	55.27
Solyc01g080030.1.1	Tomato	cytosol	42.44	54.68
Solyc12g010970.1.1	Tomato	cytosol	31.1	52.97
Solyc05g055700.2.1	Tomato	cytosol	53.2	51.26
Zm00001d008377_P001	Maize	extracellular, mitochondrion	52.91	50.84
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	53.2	50.83
TraesCS3A01G087300.1	Wheat	cytosol	52.03	50.71
TraesCS3D01G087400.1	Wheat	cytosol	52.03	50.28
TraesCS3B01G102600.1	Wheat	cytosol	50.0	48.59
HORVU3Hr1G015640.7	Barley	cytosol, mitochondrion, peroxisome	52.33	48.26
HORVU3Hr1G015680.3	Barley	cytosol, peroxisome	50.0	47.65
Solyc09g091700.2.1	Tomato	cytosol, nucleus, peroxisome	38.08	41.99
AT5G37960.1	Thale cress	cytosol	11.63	37.04
Solyc07g045080.2.1	Tomato	cytoskeleton, cytosol, peroxisome	31.98	36.54
Solyc07g045090.2.1	Tomato	cytoskeleton, cytosol, peroxisome	35.47	35.47
Solyc01g108150.2.1	Tomato	nucleus	27.91	15.14

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:K4D7K7
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc11g030720.1	EnsemblPlants:Solyc11g030720.1.1	UniParc:UPI0002769ACF
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:23051000..23056453

Molecular Weight (calculated)

38107.1 Da

IEP (calculated)

6.313

GRAVY (calculated)

-0.036

Length

344 amino acids

Sequence
(BLAST)

001: MMLGNKQVVL KNYVEGYPKE SDFELRKSMI SSDIPQGSRG LFVKNLYLGC DPYMRHRMSH HISEDVPLLA SFNPGSVIIG LGVAKVIKSA DADFEEGDYI
101: WGMTAWEDYT LILNTNGLFN IKYTDVPLSY YAGILGMPGL AAYIGFNNLC SAKEGDVVYV SSAAGGVGQL VGQFAKMKGC YVVGSASTDE KVCLLKSQLG
201: FDDAFNYKQG NDLAGALKRH FPNGIDIYFE NVGGNMLDEV LLHMNLRGRI AVSGMISQYN LKKPDGIHNL FCLISKRLRM EGFSEFDFRH KVPEYLEFAI
301: QLIREKKLLF VEDIAEGLEN AASALVGIYH GRNVGKQIIQ VSTD

Best Arabidopsis Sequence Match ( AT5G16970.1 )
(BLAST)

001: MTATNKQVIL KDYVSGFPTE SDFDFTTTTV ELRVPEGTNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYTPGQPIQG YGVSRIIESG HPDYKKGDLL
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE

Arabidopsis Description

AERNADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.