Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G03080.1 | Thale cress | cytosol | 53.7 | 16.57 |
| AT5G37980.1 | Thale cress | plastid | 53.7 | 16.43 |
| AT5G37940.1 | Thale cress | cytosol, peroxisome, plastid | 52.78 | 16.15 |
| AT5G38000.1 | Thale cress | plastid | 51.85 | 15.86 |
| AT1G26320.1 | Thale cress | cytosol | 49.07 | 15.1 |
| AT3G59845.1 | Thale cress | cytosol, golgi, peroxisome | 45.37 | 14.16 |
| AT5G17000.1 | Thale cress | cytosol | 44.44 | 13.91 |
| AT5G16960.2 | Thale cress | cytosol | 44.44 | 13.87 |
| AT5G16970.1 | Thale cress | cytosol | 43.52 | 13.62 |
| AT5G16980.2 | Thale cress | cytosol | 37.96 | 13.44 |
| AT5G16990.1 | Thale cress | cytosol | 42.59 | 13.41 |
| AT1G65560.1 | Thale cress | cytosol | 42.59 | 13.14 |
| EES02675 | Sorghum | cytosol, mitochondrion, peroxisome | 43.52 | 13.06 |
| Zm00001d008377_P001 | Maize | extracellular, mitochondrion | 42.59 | 12.85 |
| GSMUA_Achr5P17090_001 | Banana | cytosol | 38.89 | 12.17 |
| Solyc11g030720.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 37.04 | 11.63 |
| HORVU3Hr1G015680.3 | Barley | cytosol, peroxisome | 37.04 | 11.08 |
| TraesCS3B01G102600.1 | Wheat | cytosol | 35.19 | 10.73 |
| TraesCS3A01G087300.1 | Wheat | cytosol | 34.26 | 10.48 |
| TraesCS3D01G087400.1 | Wheat | cytosol | 34.26 | 10.39 |
| HORVU3Hr1G015640.7 | Barley | cytosol, mitochondrion, peroxisome | 35.19 | 10.19 |
| AT1G49670.2 | Thale cress | peroxisome | 23.15 | 3.83 |
| PGSC0003DMT400071464 | Potato | cytosol | 1.85 | 2.41 |
Protein Annotations
| ArrayExpress:AT5G37960 | EnsemblPlants:AT5G37960.1 | EnsemblPlantsGene:AT5G37960 | EntrezGene:833775 | Gene3D:3.90.180.10 | GO:GO:0005575 |
| InterPro:GroES-like_sf | PANTHER:PTHR43205 | PANTHER:PTHR43205:SF18 | ProteinID:AED94252.1 | RefSeq:AT5G37960 | RefSeq:AT5G37960-TAIR-G |
| RefSeq:NP_198612.1 | SEG:seg | SUPFAM:SSF50129 | TAIR:AT5G37960 | TAIR:AT5G37960.1 | Unigene:At.55203 |
| UniParc:UPI0000048BCA | UniProt:F4K8P3 | MapMan:35.1 | : | : | : |
Description
GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:F4K8P3]
Coordinates
chr5:+:15121438..15121836
Molecular Weight (calculated)
12045.7 Da
IEP (calculated)
10.359
GRAVY (calculated)
-0.156
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MGANRSIWND LTVSSKRKGS QSRRELEGAH KLATIIYKRI EFKILQLSNA LTNTLKSLYF VLPYVREGKI TYVEDIAQGL ENGPSALIGL FHGKNVGNNL
101: LKLLASEI
101: LKLLASEI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.