Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022471.1-P | Field mustard | cytosol | 87.43 | 87.18 |
| CDY60946 | Canola | cytosol | 86.86 | 86.86 |
| CDY16411 | Canola | cytosol | 86.86 | 86.86 |
| VIT_00s0220g00130.t01 | Wine grape | cytosol | 69.71 | 70.52 |
| KRH01782 | Soybean | nucleus | 69.43 | 69.83 |
| KRH46910 | Soybean | cytosol | 45.43 | 69.74 |
| TraesCS3D01G396000.1 | Wheat | cytosol | 40.86 | 68.75 |
| Solyc05g055700.2.1 | Tomato | cytosol | 69.14 | 67.79 |
| PGSC0003DMT400060048 | Potato | cytosol | 68.0 | 66.67 |
| GSMUA_Achr10P... | Banana | cytosol | 64.0 | 64.55 |
| TraesCS3D01G396200.1 | Wheat | cytosol, peroxisome, plastid | 64.0 | 63.64 |
| TraesCS3B01G434300.1 | Wheat | cytosol | 63.14 | 62.78 |
| TraesCS3A01G401400.1 | Wheat | cytosol | 62.0 | 61.65 |
| AT3G59845.1 | Thale cress | cytosol, golgi, peroxisome | 57.71 | 58.38 |
| HORVU3Hr1G090120.1 | Barley | mitochondrion | 39.14 | 58.05 |
| AT3G03080.1 | Thale cress | cytosol | 58.0 | 58.0 |
| AT5G16960.2 | Thale cress | cytosol | 57.14 | 57.8 |
| HORVU3Hr1G090050.28 | Barley | plastid | 62.57 | 57.48 |
| AT5G16990.1 | Thale cress | cytosol | 56.29 | 57.43 |
| AT5G16970.1 | Thale cress | cytosol | 56.57 | 57.39 |
| AT5G17000.1 | Thale cress | cytosol | 56.29 | 57.1 |
| TraesCSU01G228300.1 | Wheat | cytosol | 16.29 | 56.44 |
| AT1G26320.1 | Thale cress | cytosol | 56.0 | 55.84 |
| AT5G37980.1 | Thale cress | plastid | 54.57 | 54.11 |
| AT5G16980.2 | Thale cress | cytosol | 46.57 | 53.44 |
| AT5G37940.1 | Thale cress | cytosol, peroxisome, plastid | 52.86 | 52.41 |
| HORVU2Hr1G115460.2 | Barley | cytosol | 37.43 | 51.98 |
| AT5G38000.1 | Thale cress | plastid | 52.0 | 51.56 |
| HORVU7Hr1G075560.3 | Barley | cytosol | 35.14 | 48.81 |
| Zm00001d042555_P001 | Maize | cytosol, plastid | 64.0 | 48.38 |
| AT5G37960.1 | Thale cress | cytosol | 13.14 | 42.59 |
| GSMUA_Achr8P08570_001 | Banana | extracellular | 64.0 | 38.62 |
| EES01886 | Sorghum | extracellular | 64.57 | 34.29 |
| AT1G49670.2 | Thale cress | peroxisome | 28.29 | 15.18 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.3 | EntrezGene:842867 | InterPro:ADH_C | ProteinID:AEE34396.1 |
| ArrayExpress:AT1G65560 | EnsemblPlantsGene:AT1G65560 | RefSeq:AT1G65560 | TAIR:AT1G65560 | RefSeq:AT1G65560-TAIR-G | EnsemblPlants:AT1G65560.1 |
| TAIR:AT1G65560.1 | Unigene:At.10270 | UniProt:F4IBH8 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 |
| InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_176734.1 | PFAM:PF00107 | PFAM:PF16884 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR43205 | PANTHER:PTHR43205:SF8 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI0000163234 | : |
Description
Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
Coordinates
chr1:-:24371387..24373823
Molecular Weight (calculated)
38633.6 Da
IEP (calculated)
5.506
GRAVY (calculated)
-0.084
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.