Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G37940.1 | Thale cress | cytosol, peroxisome, plastid | 94.05 | 94.05 |
| AT5G37980.1 | Thale cress | plastid | 91.78 | 91.78 |
| AT5G16990.1 | Thale cress | cytosol | 71.1 | 73.18 |
| AT5G17000.1 | Thale cress | cytosol | 71.39 | 73.04 |
| AT1G26320.1 | Thale cress | cytosol | 72.52 | 72.93 |
| AT5G16970.1 | Thale cress | cytosol | 71.1 | 72.75 |
| AT3G03080.1 | Thale cress | cytosol | 71.95 | 72.57 |
| AT5G16960.2 | Thale cress | cytosol | 69.69 | 71.1 |
| AT5G16980.2 | Thale cress | cytosol | 58.07 | 67.21 |
| GSMUA_Achr5P17110_001 | Banana | cytosol | 45.33 | 66.12 |
| AT3G59845.1 | Thale cress | cytosol, golgi, peroxisome | 63.17 | 64.45 |
| KRH66319 | Soybean | cytosol | 61.76 | 63.56 |
| KRH66322 | Soybean | nucleus | 61.19 | 63.16 |
| KRH66306 | Soybean | nucleus | 61.19 | 62.97 |
| KRH66321 | Soybean | cytosol | 60.91 | 62.68 |
| Os04t0497000-01 | Rice | cytosol | 60.62 | 62.03 |
| KRH48965 | Soybean | cytosol | 45.61 | 61.92 |
| GSMUA_Achr6P06920_001 | Banana | cytosol | 60.34 | 61.38 |
| TraesCS5A01G303300.1 | Wheat | cytosol | 48.73 | 60.35 |
| Os12t0226900-01 | Rice | cytosol | 58.64 | 59.83 |
| TraesCS5D01G310500.1 | Wheat | cytosol | 58.07 | 59.77 |
| TraesCS5A01G303400.1 | Wheat | cytosol | 58.36 | 59.54 |
| TraesCS2D01G068900.1 | Wheat | cytosol | 58.36 | 59.54 |
| TraesCS5B01G303800.1 | Wheat | cytosol | 57.79 | 59.48 |
| TraesCS5D01G310600.1 | Wheat | cytosol | 58.36 | 59.37 |
| TraesCS2A01G070000.1 | Wheat | cytosol | 58.07 | 59.25 |
| TraesCS2B01G083300.1 | Wheat | cytosol | 57.79 | 59.13 |
| EES16901 | Sorghum | cytosol | 58.64 | 58.64 |
| Zm00001d023990_P001 | Maize | cytosol | 57.22 | 58.55 |
| TraesCS5B01G097900.1 | Wheat | cytosol | 57.51 | 58.5 |
| TraesCS2D01G068700.1 | Wheat | cytosol | 57.51 | 58.5 |
| TraesCS2B01G083600.2 | Wheat | cytosol | 56.94 | 57.93 |
| Os12t0227400-01 | Rice | cytosol | 56.66 | 57.8 |
| TraesCS5D01G103800.1 | Wheat | cytosol | 56.37 | 57.35 |
| TraesCS2A01G069900.1 | Wheat | peroxisome | 55.52 | 56.98 |
| KXG23283 | Sorghum | cytosol | 45.33 | 56.94 |
| Os12t0226700-01 | Rice | plasma membrane | 55.81 | 56.94 |
| EES08221 | Sorghum | cytosol | 56.37 | 56.53 |
| KXG28081 | Sorghum | peroxisome | 56.66 | 56.34 |
| Os12t0225900-01 | Rice | cytosol, mitochondrion | 54.96 | 56.23 |
| Zm00001d007285_P002 | Maize | peroxisome | 56.37 | 56.21 |
| OQU83135 | Sorghum | cytosol | 55.81 | 55.97 |
| Os12t0226400-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 54.39 | 55.17 |
| TraesCS5A01G091700.1 | Wheat | cytosol | 53.54 | 54.78 |
| Os11t0255500-01 | Rice | cytosol | 55.52 | 54.6 |
| Zm00001d049031_P001 | Maize | peroxisome | 37.68 | 53.2 |
| Zm00001d049032_P001 | Maize | cytosol | 53.54 | 52.65 |
| AT1G65560.1 | Thale cress | cytosol | 51.56 | 52.0 |
| AT5G37960.1 | Thale cress | cytosol | 15.86 | 51.85 |
| TraesCS5B01G303700.1 | Wheat | golgi | 59.21 | 51.23 |
| TraesCS4B01G086100.1 | Wheat | cytosol | 51.56 | 50.7 |
| TraesCS4A01G229900.1 | Wheat | cytosol | 50.14 | 50.43 |
| KRH66318 | Soybean | cytosol | 17.85 | 48.46 |
| HORVU2Hr1G115450.1 | Barley | cytosol | 10.48 | 45.68 |
| GSMUA_Achr5P17100_001 | Banana | cytosol | 12.75 | 42.06 |
| AT1G49670.2 | Thale cress | peroxisome | 30.88 | 16.72 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.3 | EntrezGene:833779 | InterPro:ADH_C | ProteinID:AED94256.1 |
| EMBL:AK228065 | ArrayExpress:AT5G38000 | EnsemblPlantsGene:AT5G38000 | RefSeq:AT5G38000 | TAIR:AT5G38000 | RefSeq:AT5G38000-TAIR-G |
| EnsemblPlants:AT5G38000.1 | TAIR:AT5G38000.1 | ProteinID:BAA98145.1 | EMBL:BT008316 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_198616.1 | PFAM:PF00107 | PFAM:PF16884 | InterPro:PKS_ER | PANTHER:PTHR43205 | PANTHER:PTHR43205:SF9 |
| UniProt:Q9LTB4 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI000009F479 | : |
Description
At5g38000 [Source:UniProtKB/TrEMBL;Acc:Q9LTB4]
Coordinates
chr5:+:15141650..15143535
Molecular Weight (calculated)
38557.4 Da
IEP (calculated)
8.432
GRAVY (calculated)
-0.062
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MANIGVVTTA TNNQVIFRNY VNGFPKESDL YIAASTVDLR VPPGSMAVLV KNLYLSCDPH SRTRMGKPDP SSPASMAHAF TIGKPISGFG VAKAIDSGHP
101: NYKTGDLLWG RVGWEEYSVI TPTPSSHFKI HHTDVPLSFY TGLLGIPGLT AYIGFYEICS PKKGETVFVS AASGAVGQLV GQFAKMAGCY VVGSASSEEK
201: VDLLKTKFGY DDAFNYKEEK DLSAALKRCF PEGIDIYFEN VGGKMLEAVL ENMRTHGRIA ACGMISQYNL KKPEVLHNTA TIVHKRIRVQ GFAAVEFFDR
301: YSKFLDFILP HVREGKLTYV EDISQGLENG PSALIGLFHG KNVGKQLVEV ARV
101: NYKTGDLLWG RVGWEEYSVI TPTPSSHFKI HHTDVPLSFY TGLLGIPGLT AYIGFYEICS PKKGETVFVS AASGAVGQLV GQFAKMAGCY VVGSASSEEK
201: VDLLKTKFGY DDAFNYKEEK DLSAALKRCF PEGIDIYFEN VGGKMLEAVL ENMRTHGRIA ACGMISQYNL KKPEVLHNTA TIVHKRIRVQ GFAAVEFFDR
301: YSKFLDFILP HVREGKLTYV EDISQGLENG PSALIGLFHG KNVGKQLVEV ARV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.