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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os12t0226900-01 Rice cytosol 85.55 85.55
Os12t0227400-01 Rice cytosol 84.1 84.1
Zm00001d023990_P001 Maize cytosol 76.59 76.81
TraesCS5A01G303300.1 Wheat cytosol 63.01 76.49
Os12t0226400-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 76.01 75.57
TraesCS5A01G303400.1 Wheat cytosol 74.86 74.86
TraesCS5D01G310600.1 Wheat cytosol 74.86 74.64
EES16901 Sorghum cytosol 76.01 74.5
Os12t0225900-01 Rice cytosol, mitochondrion 74.28 74.49
TraesCS5D01G310500.1 Wheat cytosol 72.83 73.47
TraesCS5B01G303800.1 Wheat cytosol 72.54 73.18
TraesCS5B01G097900.1 Wheat cytosol 72.54 72.33
HORVU2Hr1G010270.1 Barley cytosol, peroxisome 71.97 71.76
HORVU5Hr1G024040.1 Barley cytosol 71.68 71.68
TraesCS2A01G070000.1 Wheat cytosol 71.68 71.68
TraesCS5D01G103800.1 Wheat cytosol 71.68 71.47
TraesCS2D01G068900.1 Wheat cytosol 71.39 71.39
TraesCS2D01G068700.1 Wheat cytosol 71.39 71.18
TraesCS2B01G083300.1 Wheat cytosol 70.23 70.43
TraesCS2B01G083600.2 Wheat cytosol 70.52 70.32
TraesCS5A01G091700.1 Wheat cytosol 69.65 69.86
TraesCS2A01G069900.1 Wheat peroxisome 68.5 68.9
KXG23283 Sorghum cytosol 54.91 67.62
GSMUA_Achr5P17110_001 Banana cytosol 47.11 67.36
VIT_05s0094g01120.t01 Wine grape cytosol 65.32 65.51
HORVU2Hr1G010250.1 Barley cytosol 66.19 65.06
Os04t0497000-01 Rice cytosol 63.29 63.48
VIT_05s0094g01160.t01 Wine grape cytosol 63.29 63.48
Bra032019.1-P Field mustard cytosol 61.27 63.1
VIT_05s0094g01130.t01 Wine grape cytosol 62.14 62.87
TraesCS5B01G303700.1 Wheat golgi 73.99 62.75
CDY43153 Canola cytosol 62.14 62.5
CDY28735 Canola cytosol 62.14 62.32
Solyc01g080030.1.1 Tomato cytosol 47.69 61.8
VIT_05s0094g01140.t01 Wine grape cytosol 60.98 61.7
Solyc12g010960.1.1 Tomato cytosol 26.88 61.59
Solyc12g096760.1.1 Tomato extracellular 60.98 61.52
Os11t0255500-01 Rice cytosol 63.29 61.0
AT3G03080.1 Thale cress cytosol 61.56 60.86
Bra008581.1-P Field mustard cytosol 60.4 60.76
CDX69408 Canola cytosol 60.4 60.76
Solyc03g007200.1.1 Tomato cytosol 54.34 60.06
Solyc06g063040.1.1 Tomato extracellular, plastid 59.54 60.06
AT5G16990.1 Thale cress cytosol 59.54 60.06
CDX85479 Canola cytosol 60.69 60.0
VIT_05s0094g01150.t01 Wine grape cytosol 59.54 59.88
CDY16966 Canola cytosol 60.69 59.83
CDY38077 Canola cytosol 60.4 59.71
Solyc12g010950.1.1 Tomato cytosol 59.54 59.54
Bra023591.1-P Field mustard cytosol 60.12 59.43
AT5G16970.1 Thale cress cytosol 59.25 59.42
CDY16150 Canola cytosol 60.12 59.26
Bra024723.1-P Field mustard cytosol 60.12 59.26
AT5G16960.2 Thale cress cytosol 59.25 59.25
AT1G26320.1 Thale cress cytosol 59.83 58.97
CDX85014 Canola cytosol 59.83 58.97
CDX78721 Canola cytosol 60.4 58.87
AT5G17000.1 Thale cress cytosol 58.38 58.55
VIT_05s0094g01260.t01 Wine grape cytosol 57.51 58.19
AT5G37980.1 Thale cress plastid 58.09 56.94
AT5G37940.1 Thale cress cytosol, peroxisome, plastid 57.8 56.66
VIT_05s0094g01230.t01 Wine grape cytosol 45.09 56.52
AT5G38000.1 Thale cress plastid 56.94 55.81
VIT_05s0094g01250.t01 Wine grape cytosol 44.22 54.84
AT5G16980.2 Thale cress cytosol 48.27 54.75
AT3G59845.1 Thale cress cytosol, golgi, peroxisome 54.34 54.34
HORVU2Hr1G028990.1 Barley plastid 29.19 54.01
Solyc12g010970.1.1 Tomato cytosol 31.21 53.47
Bra007482.1-P Field mustard cytosol 53.76 52.69
CDY05974 Canola cytosol 53.47 52.41
Bra006381.1-P Field mustard cytosol 60.4 48.27
CDX70729 Canola golgi, plastid 60.98 44.61
Os06t0602900-01 Rice cytosol 43.35 43.86
Os09t0459800-01 Rice nucleus, plasma membrane 30.92 16.88
Protein Annotations
Gene3D:3.40.50.720Gene3D:3.90.180.10EntrezGene:4351817MapMan:50.1.3ProteinID:ABA96819.1InterPro:ADH_C
ProteinID:BAF29451.1ProteinID:BAT16404.1ProteinID:EAZ20020.1GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:GroES-like_sfInterPro:NAD(P)-bd_dom_sfEnsemblPlantsGene:Os12g0226700
EnsemblPlants:Os12t0226700-01PFAM:PF00107PFAM:PF16884InterPro:PKS_ERPANTHER:PTHR43205PANTHER:PTHR43205:SF14
UniProt:Q2QVJ8SMART:SM00829SUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI0000681765RefSeq:XP_015620334.1
SEG:seg:::::
Description
Similar to Allyl alcohol dehydrogenase. (Os12t0226700-01)
Coordinates
chr12:+:6911276..6913929
Molecular Weight (calculated)
38639.5 Da
IEP (calculated)
5.025
GRAVY (calculated)
-0.107
Length
346 amino acids
Sequence
(BLAST)
001: MAAATVSNKR VILKRYVTGL LSEDDMEVVT VEAPPLDVPT GSKGVVVKNL YVSCDPYMRN RMTHHELPSY IPDFVPGEVL ENFGVMKVIS SGHLDFKAGD
101: LVWGMTGWEE YTVINNPESL FKINHPELPL SYYTGILGMP GLTAYAGFFD VPKPKKGEYV FISGASGAVG QVVGQLAKIT GCYVIGSAGY DEKVNLLKSK
201: FGFDDAFNYK KEQDLEAALR RYFPEGIDIY YENVGGKMLD AVLPNMSLGG RIVACGMISQ YNLEQPEGVR NLYYIVTKRL RMEGFHVFDY YDRYYRFEEE
301: MAGYLKEEKV SYVEDVVEGL DTAPAALIRL FTGRSVGKQL VAVARE
Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)
001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE
Arabidopsis Description
Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.