CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008581.1-P	Field mustard	cytosol	100.0	100.0
CDY16966	Canola	cytosol	98.26	96.3
AT5G16990.1	Thale cress	cytosol	87.21	87.46
AT5G17000.1	Thale cress	cytosol	87.21	86.96
CDX78721	Canola	cytosol	89.24	86.48
AT5G16970.1	Thale cress	cytosol	86.05	85.8
AT5G16980.2	Thale cress	cytosol	70.64	79.67
CDY43153	Canola	cytosol	79.36	79.36
CDY28735	Canola	cytosol	78.78	78.55
CDY16150	Canola	cytosol	77.03	75.5
CDY38077	Canola	cytosol	76.45	75.14
CDX85014	Canola	cytosol	76.45	74.93
CDX85479	Canola	cytosol	76.16	74.86
GSMUA_Achr5P17110_001	Banana	cytosol	50.0	71.07
KRH66319	Soybean	cytosol	70.64	70.85
KRH66322	Soybean	nucleus	70.35	70.76
KRH66306	Soybean	nucleus	70.06	70.26
KRH48965	Soybean	cytosol	51.45	68.08
KRH66321	Soybean	cytosol	67.73	67.93
GSMUA_Achr6P06920_001	Banana	cytosol	66.28	65.71
TraesCS5A01G303300.1	Wheat	cytosol	53.78	64.91
CDX70729	Canola	golgi, plastid	89.24	64.9
TraesCS5D01G310500.1	Wheat	cytosol	64.24	64.43
Os04t0497000-01	Rice	cytosol	64.24	64.06
TraesCS5A01G303400.1	Wheat	cytosol	64.24	63.87
TraesCS5B01G303800.1	Wheat	cytosol	63.37	63.56
CDY05974	Canola	cytosol	65.12	63.46
Zm00001d023990_P001	Maize	cytosol	63.08	62.9
TraesCS5D01G310600.1	Wheat	cytosol	63.37	62.82
TraesCS2D01G068900.1	Wheat	cytosol	62.79	62.43
TraesCS2A01G070000.1	Wheat	cytosol	62.79	62.43
Os12t0226900-01	Rice	cytosol	62.79	62.43
TraesCS2D01G068700.1	Wheat	cytosol	62.5	61.96
TraesCS2B01G083300.1	Wheat	cytosol	61.92	61.74
CDY60946	Canola	cytosol	62.79	61.71
EES16901	Sorghum	cytosol	63.08	61.47
TraesCS2B01G083600.2	Wheat	cytosol	61.63	61.1
CDY16411	Canola	cytosol	61.92	60.86
TraesCS5B01G097900.1	Wheat	cytosol	61.34	60.81
TraesCS2A01G069900.1	Wheat	peroxisome	60.76	60.76
Os12t0227400-01	Rice	cytosol	61.05	60.69
Os12t0226700-01	Rice	plasma membrane	60.76	60.4
TraesCS5D01G103800.1	Wheat	cytosol	60.47	59.94
Os12t0225900-01	Rice	cytosol, mitochondrion	59.01	58.84
KXG23283	Sorghum	cytosol	47.97	58.72
Zm00001d007285_P002	Maize	peroxisome	60.17	58.47
KXG28081	Sorghum	peroxisome	59.59	57.75
TraesCS5A01G091700.1	Wheat	cytosol	57.85	57.68
EES08221	Sorghum	cytosol	58.14	56.82
OQU83135	Sorghum	cytosol	57.56	56.25
Os12t0226400-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	56.1	55.46
Os11t0255500-01	Rice	cytosol	56.69	54.32
Zm00001d049032_P001	Maize	cytosol	56.4	54.04
Zm00001d049031_P001	Maize	peroxisome	39.24	54.0
TraesCS5B01G303700.1	Wheat	golgi	63.95	53.92
KRH66318	Soybean	cytosol	20.35	53.85
TraesCS4B01G086100.1	Wheat	cytosol	55.52	53.2
TraesCS4A01G229900.1	Wheat	cytosol	54.07	52.99
HORVU2Hr1G115450.1	Barley	cytosol	11.34	48.15
GSMUA_Achr5P17100_001	Banana	cytosol	13.37	42.99
CDY28090	Canola	cytosol, peroxisome, plastid	33.72	18.41
CDY32846	Canola	cytosol, peroxisome, plastid	33.43	18.28
CDY51039	Canola	cytosol, peroxisome, plastid	33.43	18.25
CDY16520	Canola	cytosol, peroxisome, plastid	33.14	18.12

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	GO:A0A078C2X9	InterPro:ADH_C	EnsemblPlants:CDX69408
ProteinID:CDX69408	ProteinID:CDX69408.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135376001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI00025446AD	:	:	:	:

Description

BnaA10g17570D

Coordinates

chrLK031790:+:91392..93080

Molecular Weight (calculated)

37977.9 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.058

Length

344 amino acids

Sequence
(BLAST)

001: MSTVTNKQVI LRDYVSGFPK ESDFDITTTT VELKLPEGSN SVLVKNLYLS CDPYMRSRMG KPAASGIAQA YTPGKPILGF GVSRVIESAH PDYKEGDLMW
101: GIVGWEEYSV VTPIPDMHFK IQNTDVPLSY YTGLLGMPGM TAYAGFYEVC SPKKGETVYV SAASGAVGQL VGQFAKMMGC YVVGSAGSKE KVDLLKNKFG
201: FDDAFNYKEE QDLTAALKRC FPKGIDIYFE NVGGKMLDAV LLNMNIHGRI AVCGMISQYN LENHEGVHNL STIIYKRIRI QGFAVFDYYD KYSKFLEFVI
301: PCIKEGKIAY VEDVAEGLEK GPEALVGLFH GKNVGKQVVV IARE

Best Arabidopsis Sequence Match ( AT5G17000.1 )
(BLAST)

001: MTATNKQVVL KNYVSGFPKE SDFDFKTTTV EFKLPGGSNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYAPGKPIFG YGVSRVIESG HPDYKKGDLL
101: WGIVGWEEYS VITPMTHMHF KIQHTDIPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQFAKMMG CYVVGSAGST EKVDLLKTKF
201: GFDDAFNYKE EPDLSAALKR CFPTGIDIYF ENVGGKMLDA VLLNMNPHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFAVFDFY EKYSKFLDFV
301: LPHIKEGKIT YVEDVADGLE KGPEALVGLF HGKNVGKQVV VIARE

Arabidopsis Description

AT5g16970/F2K13_120 [Source:UniProtKB/TrEMBL;Acc:Q93Z72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.