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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 4
  • plastid 1
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH66319 Soybean cytosol 85.09 84.84
KRH66321 Soybean cytosol 83.63 83.38
KRH48965 Soybean cytosol 61.11 80.38
KRH66306 Soybean nucleus 79.53 79.3
Bra008581.1-P Field mustard cytosol 70.76 70.35
CDX69408 Canola cytosol 70.76 70.35
CDY43153 Canola cytosol 70.47 70.06
KRH36166 Soybean cytosol 51.17 70.0
AT5G16970.1 Thale cress cytosol 70.18 69.57
AT5G16990.1 Thale cress cytosol 69.59 69.39
Bra032019.1-P Field mustard cytosol 68.13 69.35
AT5G17000.1 Thale cress cytosol 69.59 68.99
CDY28735 Canola cytosol 69.59 68.99
AT1G26320.1 Thale cress cytosol 70.18 68.38
CDY16966 Canola cytosol 70.18 68.38
AT3G03080.1 Thale cress cytosol 69.3 67.71
CDX78721 Canola cytosol 69.59 67.04
CDY16150 Canola cytosol 68.13 66.38
Bra024723.1-P Field mustard cytosol 68.13 66.38
CDY38077 Canola cytosol 67.84 66.29
CDX85014 Canola cytosol 67.84 66.1
AT5G16960.2 Thale cress cytosol 66.67 65.9
CDX85479 Canola cytosol 67.25 65.71
Bra023591.1-P Field mustard cytosol 66.67 65.14
KRH46910 Soybean cytosol 43.27 64.91
KRH66318 Soybean cytosol 24.56 64.62
AT5G16980.2 Thale cress cytosol 57.6 64.59
AT3G59845.1 Thale cress cytosol, golgi, peroxisome 64.91 64.16
KRH66323 Soybean cytosol 63.74 63.01
AT5G37940.1 Thale cress cytosol, peroxisome, plastid 64.62 62.61
AT5G37980.1 Thale cress plastid 64.33 62.32
AT5G38000.1 Thale cress plastid 63.16 61.19
KRH44857 Soybean cytosol 31.29 61.14
KRH01782 Soybean nucleus 61.99 60.92
Bra007482.1-P Field mustard cytosol 62.87 60.91
CDY05974 Canola cytosol 62.87 60.91
KRG90594 Soybean mitochondrion 18.71 58.72
Bra006381.1-P Field mustard cytosol 69.01 54.5
KRH66218 Soybean cytosol 19.01 54.17
KRG99608 Soybean cytosol 29.53 52.33
CDX70729 Canola golgi, plastid 69.88 50.53
KRH54972 Soybean cytosol 45.91 45.38
KRH26780 Soybean cytosol 40.35 39.43
KRH49605 Soybean cytosol 13.45 39.32
KRH22573 Soybean cytoskeleton, cytosol, peroxisome 38.89 36.54
KRH26779 Soybean cytosol 38.3 36.19
KRH50260 Soybean extracellular 18.71 30.77
KRH71155 Soybean nucleus 32.16 17.38
KRG88432 Soybean cytosol 7.31 9.84
Protein Annotations
Gene3D:3.40.50.720Gene3D:3.90.180.10MapMan:50.1.3EMBL:ACUP02001938InterPro:ADH_CEnsemblPlantsGene:GLYMA_03G098900
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
InterPro:GroES-like_sfUniProt:I1JMF7EnsemblPlants:KRH66322ProteinID:KRH66322ProteinID:KRH66322.1InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107PFAM:PF16884InterPro:PKS_ERPANTHER:PTHR43205PANTHER:PTHR43205:SF9SMART:SM00829
SUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI0002336E8D:::
Description
hypothetical protein
Coordinates
chr3:+:28705216..28709395
Molecular Weight (calculated)
37838.9 Da
IEP (calculated)
7.575
GRAVY (calculated)
-0.049
Length
342 amino acids
Sequence
(BLAST)
001: MTQVRNKQVV LRDYVTGFPK ESDMNIVEGT IILKVPEGSN DVLLKNLYLS CDPYMRLLMA KDRSFGDGSF TLASPLKGYG VSQVLESGRP DYKKGDLVWG
101: ITKWEEYSLV PSSLIHFKIE HTDVPLSYYT GILGMPGMTA YAGFFEVGSP KKGDTVFVSA ASGAVGQLVG QFAKLTGCYV VGSAGSKEKV DLLKNKLGFD
201: EAFNYKEEPD LNAALKRYFP EGIDIYFENV GGKTLDAVLP NMKFHGRIPV CGMISQYNLT QFDGVTNLAN LIFKRVKMEG FIATDFYHLY PKFLEFVLPH
301: IREGKVVYVE DIAEGLEKGP AALVGLYTGR NVGKQVVVVT HK
Best Arabidopsis Sequence Match ( AT5G16970.1 )
(BLAST)
001: MTATNKQVIL KDYVSGFPTE SDFDFTTTTV ELRVPEGTNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYTPGQPIQG YGVSRIIESG HPDYKKGDLL
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE
Arabidopsis Description
AERNADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.