CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99608	Soybean	cytosol	50.0	33.68
KRH66218	Soybean	cytosol	26.15	28.33
KRH66306	Soybean	nucleus	70.0	26.53
KRH66319	Soybean	cytosol	69.23	26.24
KRH66321	Soybean	cytosol	65.38	24.78
KRH66322	Soybean	nucleus	64.62	24.56
Bra032019.1-P	Field mustard	cytosol	53.08	20.54
CDY43153	Canola	cytosol	53.85	20.35
CDX69408	Canola	cytosol	53.85	20.35
Bra008581.1-P	Field mustard	cytosol	53.85	20.35
KRH66323	Soybean	cytosol	53.85	20.23
AT1G26320.1	Thale cress	cytosol	53.85	19.94
AT3G03080.1	Thale cress	cytosol	53.08	19.71
CDY28735	Canola	cytosol	52.31	19.71
CDY16966	Canola	cytosol	53.08	19.66
AT5G16970.1	Thale cress	cytosol	51.54	19.42
KRH36166	Soybean	cytosol	36.92	19.2
AT5G17000.1	Thale cress	cytosol	50.77	19.13
AT5G16990.1	Thale cress	cytosol	50.0	18.95
CDX78721	Canola	cytosol	51.54	18.87
Bra023591.1-P	Field mustard	cytosol	50.0	18.57
CDX85014	Canola	cytosol	50.0	18.52
CDY16150	Canola	cytosol	50.0	18.52
Bra024723.1-P	Field mustard	cytosol	50.0	18.52
CDX85479	Canola	cytosol	49.23	18.29
CDY38077	Canola	cytosol	49.23	18.29
AT5G37940.1	Thale cress	cytosol, peroxisome, plastid	49.23	18.13
AT5G16960.2	Thale cress	cytosol	47.69	17.92
AT5G38000.1	Thale cress	plastid	48.46	17.85
AT5G37980.1	Thale cress	plastid	46.92	17.28
AT3G59845.1	Thale cress	cytosol, golgi, peroxisome	44.62	16.76
CDY05974	Canola	cytosol	44.62	16.43
Bra007482.1-P	Field mustard	cytosol	44.62	16.43
KRH01782	Soybean	nucleus	43.85	16.38
Bra006381.1-P	Field mustard	cytosol	51.54	15.47
CDX70729	Canola	golgi, plastid	53.08	14.59
AT5G16980.2	Thale cress	cytosol	31.54	13.44
KRH48965	Soybean	cytosol	26.15	13.08
KRH54972	Soybean	cytosol	33.08	12.43
KRH26780	Soybean	cytosol	27.69	10.29
KRH22573	Soybean	cytoskeleton, cytosol, peroxisome	26.92	9.62
KRH26779	Soybean	cytosol	25.38	9.12
KRH46910	Soybean	cytosol	15.38	8.77
KRH71155	Soybean	nucleus	20.0	4.11
KRG88432	Soybean	cytosol	6.92	3.54
KRH44857	Soybean	cytosol	3.85	2.86
KRH49605	Soybean	cytosol	2.31	2.56
KRH50260	Soybean	extracellular	1.54	0.96
KRG90594	Soybean	mitochondrion	0.0	0.0

Protein Annotations

EMBL:ACUP02001938	EnsemblPlants:KRH66318	EnsemblPlantsGene:GLYMA_03G098500	Gene3D:3.90.180.10	InterPro:GroES-like_sf	PANTHER:PTHR43205
PANTHER:PTHR43205:SF9	ProteinID:KRH66318	ProteinID:KRH66318.1	SUPFAM:SSF50129	UniParc:UPI0002962E1F	UniProt:K7KE32
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:28616477..28619602

Molecular Weight (calculated)

14328.9 Da

IEP (calculated)

4.572

GRAVY (calculated)

-0.312

Length

130 amino acids

Sequence
(BLAST)

001: MTQVRNKQGL LRDYATGFPK ESDMNVVESV ITLKLPKDSN EDTTDAKLGA CTPGFPLTGY GVSKVLESGH PDYKNDLEWG ITKWEEYSLV SSTQILFKIE
101: HTDVSLSYYT EILGIKESVF ISATSGAVGQ

Best Arabidopsis Sequence Match ( AT5G17000.2 )
(BLAST)

001: MTATNKQVVL KNYVSGFPKE SDFDFKTTTV EFKLPGGSNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYAPGKPIFG YGVSRVIESG HPDYKKGDLL
101: WGIVGWEEYS VITPMTHMHF KIQHTDIPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQFAKMMG CYVVGSAGST EKVDLLKTKF
201: GFDDAFNYKE EPDLSAALKR FSELLISKRL MSLTVRIGLH KKAAIHN

Arabidopsis Description

AT5g16970/F2K13_120 [Source:UniProtKB/TrEMBL;Acc:Q93Z72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.