CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36166	Soybean	cytosol	48.84	67.6
KRH66319	Soybean	cytosol	64.16	64.72
KRH48965	Soybean	cytosol	47.98	63.85
KRH66322	Soybean	nucleus	63.01	63.74
KRH44857	Soybean	cytosol	32.08	63.43
KRH66321	Soybean	cytosol	62.43	62.97
KRH66306	Soybean	nucleus	62.43	62.97
VIT_05s0094g01230.t01	Wine grape	cytosol	49.13	61.59
KRH46910	Soybean	cytosol	39.6	60.09
KRG90594	Soybean	mitochondrion	18.21	57.8
KRH01782	Soybean	nucleus	55.78	55.46
KRH66318	Soybean	cytosol	20.23	53.85
KRH54972	Soybean	cytosol	43.93	43.93
KRH66218	Soybean	cytosol	15.03	43.33
KRG99608	Soybean	cytosol	21.97	39.38
KRH26780	Soybean	cytosol	36.99	36.57
KRH26779	Soybean	cytosol	35.84	34.25
KRH22573	Soybean	cytoskeleton, cytosol, peroxisome	35.84	34.07
KRH49605	Soybean	cytosol	11.27	33.33
KRH50260	Soybean	extracellular	18.21	30.29
KRH71155	Soybean	nucleus	31.79	17.38
KRG88432	Soybean	cytosol	6.36	8.66

Protein Annotations

EntrezGene:100813407	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EMBL:ACUP02001938	InterPro:ADH_C
EnsemblPlantsGene:GLYMA_03G099000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	UniProt:I1JMF8	EnsemblPlants:KRH66323	ProteinID:KRH66323	ProteinID:KRH66323.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002336E8E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:28715707..28725401

Molecular Weight (calculated)

38533.7 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.048

Length

346 amino acids

Sequence
(BLAST)

001: MAEKEVRNKQ LVLRDYVTGF PKESELYVTS NGTIKLKLEG DSKRVLVKNL FLAADPHLRP LMKKADNLSV LQSFTPGLPL YGYGVAKVVD SRHPDFEEGD
101: FVWGITGWEE YTIISSFEHL FKIQHSDVPL SYYAGILGMP GLTAYSGFFE VCDPKKGEHV FVSAAAGGVG QLVGQYAKLM GCYVVGSAGS KEKVDMLKDK
201: FGFDEAFNYK EEHDLEAALK RYFPQGIDIY FDLVGGKMLD AALVNMRVHG RIGVCGVISQ LTLKEPEALK NAMCLVYKRV RMQGFNVVDY YHIYPKFLDL
301: LLPQIREGKI SCLEDIVEGL ENGPHALIRV FSGHAIGKQV VSVANE

Best Arabidopsis Sequence Match ( AT5G16990.1 )
(BLAST)

001: MTTNKQVIFK DHVSGFPKES DFNFTTTTVE LRVPEGSKSV LVKNLYLSCD PYMRSRMGKP DPSSALAQAY APGKPIYGYG VSRVIESGHP DYKKGDLLWG
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE

Arabidopsis Description

P2NADP-dependent alkenal double bond reductase P2 [Source:UniProtKB/Swiss-Prot;Acc:Q39173]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.