CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22573	Soybean	cytoskeleton, cytosol, peroxisome	91.71	91.21
KRH26780	Soybean	cytosol	74.31	76.86
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	66.3	66.48
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	62.98	63.16
Solyc07g045090.2.1	Tomato	cytoskeleton, cytosol, peroxisome	59.12	62.21
Solyc07g045080.2.1	Tomato	cytoskeleton, cytosol, peroxisome	50.83	61.13
KRH48965	Soybean	cytosol	30.39	42.31
KRH66322	Soybean	nucleus	36.19	38.3
KRH46910	Soybean	cytosol	24.03	38.16
KRH66306	Soybean	nucleus	35.64	37.61
KRH66319	Soybean	cytosol	35.64	37.61
KRH36166	Soybean	cytosol	25.97	37.6
KRH66321	Soybean	cytosol	35.36	37.32
KRH44857	Soybean	cytosol	17.96	37.14
KRH01782	Soybean	nucleus	34.81	36.21
KRH66323	Soybean	cytosol	34.25	35.84
KRH54972	Soybean	cytosol	32.04	33.53
KRG90594	Soybean	mitochondrion	8.29	27.52
KRH50260	Soybean	extracellular	15.75	27.4
KRH66318	Soybean	cytosol	9.12	25.38
KRG99608	Soybean	cytosol	10.77	20.21
KRH66218	Soybean	cytosol	5.8	17.5
KRH71155	Soybean	nucleus	23.76	13.59
KRH49605	Soybean	cytosol	4.14	12.82
KRG88432	Soybean	cytosol	3.87	5.51

Protein Annotations

EntrezGene:100792881	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EMBL:ACUP02007745	InterPro:ADH_C
EMBL:BT098187	UniProt:C6TKH5	EnsemblPlantsGene:GLYMA_12G193400	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlants:KRH26779	ProteinID:KRH26779
ProteinID:KRH26779.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205
PANTHER:PTHR43205:SF6	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001B16C53	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:35488883..35491610

Molecular Weight (calculated)

39889.0 Da

IEP (calculated)

5.318

GRAVY (calculated)

-0.059

Length

362 amino acids

Sequence
(BLAST)

001: MGEEVKSLVV EEEMGVVESK EWYLVSYAPH GVPTTDHLKL RKVRLSIAPE SIPDAHVAIE MLLFSVDPYL RGRFTGTLDG LYFPQFELNQ VITIFGIGRV
101: KRSNDSKYEE GDIVLSASFP VAEYCVMPSS EIDAKIDAAS GISLPDYLST LGVPGFAAWL GIEVVADPKP GSNVFISAAS GGVGMIAGQL AKIRGCRVIG
201: STGSDEKVRL IKEEFGYDDG FNYKKEEDLD AVLSKFFPNG IDVYLDNVGG KMLESVLNHV NKFARIPLCG MISQYNQAWT EREGVRNLLN LVGKEVRMEG
301: FLLKTHFNRF GDFAKEIEGH IKEGRLKPKT KINFGIESFL DSLNSLFSSS NIGKVVIQVN KA

Best Arabidopsis Sequence Match ( AT1G65560.1 )
(BLAST)

001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE

Arabidopsis Description

Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.