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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, peroxisome
Any Predictor:cytoskeleton, cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g045080.2.1 Tomato cytoskeleton, cytosol, peroxisome 80.81 92.36
KRH26780 Soybean cytosol 65.12 64.0
VIT_12s0059g00670.t01 Wine grape cytoskeleton, cytosol, peroxisome 64.53 61.5
KRH26779 Soybean cytosol 62.21 59.12
KRH22573 Soybean cytoskeleton, cytosol, peroxisome 62.5 59.07
VIT_12s0059g00690.t01 Wine grape cytoskeleton, cytosol, peroxisome 61.63 58.73
Solyc12g010960.1.1 Tomato cytosol 20.06 45.7
Solyc12g096760.1.1 Tomato extracellular 41.86 41.98
Solyc12g010950.1.1 Tomato cytosol 39.53 39.31
Solyc03g007200.1.1 Tomato cytosol 35.76 39.3
Solyc06g063040.1.1 Tomato extracellular, plastid 38.08 38.19
Solyc01g080030.1.1 Tomato cytosol 28.2 36.33
Solyc11g030720.1.1 Tomato cytoskeleton, cytosol, peroxisome 35.47 35.47
Solyc05g055700.2.1 Tomato cytosol 35.47 34.17
Solyc09g091700.2.1 Tomato cytosol, nucleus, peroxisome 30.23 33.33
Solyc12g010970.1.1 Tomato cytosol 18.9 32.18
Solyc06g064670.1.1 Tomato cytosol 6.1 27.27
Solyc01g108150.2.1 Tomato nucleus 25.0 13.56
Protein Annotations
Gene3D:3.40.50.720Gene3D:3.90.180.10MapMan:50.1.3InterPro:ADH_CGO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:GroES-like_sfUniProt:K4CER7
InterPro:NAD(P)-bd_dom_sfPFAM:PF00107PFAM:PF16884InterPro:PKS_ERPANTHER:PTHR43205PANTHER:PTHR43205:SF6
SMART:SM00829SUPFAM:SSF50129SUPFAM:SSF51735EnsemblPlantsGene:Solyc07g045090.2EnsemblPlants:Solyc07g045090.2.1UniParc:UPI000276C9FD
SEG:seg:::::
Description
No Description!
Coordinates
chr7:+:58206449..58208220
Molecular Weight (calculated)
37712.7 Da
IEP (calculated)
7.100
GRAVY (calculated)
0.003
Length
344 amino acids
Sequence
(BLAST)
001: MATAELESRE WYVASYAPTG VPNSDHIKLR TLTLSIPDDH VAFQILYVSI DPYMRTQLSG LHDGLSLPQI PLGQVITAFG IGKVVRSKDT NFSEGELVMS
101: RICPVAEFGV LPSNLLQKIN HAHGVALPDY LSCLGMPGIT AWVGIEKIGN AKAGSNVYIS AAAGGVGIIA GQLAKVKGCR VVGSVGSDHK VKLLKEECGY
201: DEAFNYRIET DYDAALTKYF PNGIDVYFDN VGGKMLEAVL NHVNHGARIA LCGMISEYNK VWKEREGVRN LLNMVGKEVM MKGFMVGSYY NHFEEFVKEM
301: EVHLKEGKIK SKHKIYNGIE SFLESLTSLF SSSNVGKVIL QVTP
Best Arabidopsis Sequence Match ( AT1G26320.1 )
(BLAST)
001: MTNAEAVTVT NKQIIFPDYV TGFPKESDLK ITTTTIDLRL PEGSTSVLVK NLYLSCDPYM RICMGKPDPL SSSLVPPYKT GVPIIGLGVS KVIDSGHPDY
101: KKGDLLWGLV GWEEYSVITL TTYSHFKIEH TDVPLSYYTG LLGMPGMTAY AGFYEVCSPK KGETVFVSAA SGAVGQLVGQ FAKLMGCYVV GSAGSKEKVY
201: LLKTKFGFDD AFNYKEEKDF SAALKRYFPE GIDIYFENVG GKMLDAVLIN MKLHGRVAVC GMISQYNLVD PEGVHNLPTI LYKRIQLQGF GVCDFYDKYP
301: KFLDFVLPYI REGKITYVED IAEGFESGPS ALLGLFEGKN VGKQLFVVAR E
Arabidopsis Description
Allyl alcohol dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q9C677]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.