Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g010950.1.1 | Tomato | cytosol | 82.18 | 47.98 |
| Solyc03g007200.1.1 | Tomato | cytosol | 73.76 | 47.6 |
| Solyc01g080030.1.1 | Tomato | cytosol | 62.38 | 47.19 |
| Solyc06g063040.1.1 | Tomato | extracellular, plastid | 76.24 | 44.9 |
| GSMUA_Achr5P17100_001 | Banana | cytosol | 22.28 | 42.06 |
| Solyc12g096760.1.1 | Tomato | extracellular | 67.33 | 39.65 |
| VIT_05s0094g01120.t01 | Wine grape | cytosol | 62.38 | 36.52 |
| GSMUA_Achr6P06920_001 | Banana | cytosol | 58.42 | 34.01 |
| Solyc05g055700.2.1 | Tomato | cytosol | 59.9 | 33.89 |
| TraesCS5D01G310500.1 | Wheat | cytosol | 56.44 | 33.24 |
| Os04t0497000-01 | Rice | cytosol | 56.44 | 33.04 |
| TraesCS5A01G303400.1 | Wheat | cytosol | 55.94 | 32.66 |
| TraesCS5D01G310600.1 | Wheat | cytosol | 55.94 | 32.56 |
| TraesCS5B01G303800.1 | Wheat | cytosol | 54.46 | 32.07 |
| TraesCS5B01G097900.1 | Wheat | cytosol | 54.46 | 31.7 |
| Os12t0227400-01 | Rice | cytosol | 53.96 | 31.5 |
| TraesCS2B01G083300.1 | Wheat | cytosol | 53.47 | 31.3 |
| Os12t0226700-01 | Rice | plasma membrane | 53.47 | 31.21 |
| Solyc11g030720.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 52.97 | 31.1 |
| TraesCS2A01G070000.1 | Wheat | cytosol | 52.97 | 30.92 |
| TraesCS2D01G068700.1 | Wheat | cytosol | 52.97 | 30.84 |
| Os12t0226900-01 | Rice | cytosol | 52.48 | 30.64 |
| TraesCS5D01G103800.1 | Wheat | cytosol | 52.48 | 30.55 |
| TraesCS2B01G083600.2 | Wheat | cytosol | 51.98 | 30.26 |
| Zm00001d023990_P001 | Maize | cytosol | 51.49 | 30.14 |
| KXG28081 | Sorghum | peroxisome | 52.97 | 30.14 |
| EES08221 | Sorghum | cytosol | 52.48 | 30.11 |
| TraesCS2D01G068900.1 | Wheat | cytosol | 51.49 | 30.06 |
| TraesCS2A01G069900.1 | Wheat | peroxisome | 50.99 | 29.94 |
| TraesCS5A01G091700.1 | Wheat | cytosol | 50.99 | 29.86 |
| Os12t0225900-01 | Rice | cytosol, mitochondrion | 50.99 | 29.86 |
| OQU83135 | Sorghum | cytosol | 51.49 | 29.55 |
| Zm00001d049032_P001 | Maize | cytosol | 52.48 | 29.53 |
| EES16901 | Sorghum | cytosol | 51.49 | 29.46 |
| Zm00001d007285_P002 | Maize | peroxisome | 51.49 | 29.38 |
| Os12t0226400-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 50.49 | 29.31 |
| Solyc09g091700.2.1 | Tomato | cytosol, nucleus, peroxisome | 45.05 | 29.17 |
| TraesCS4B01G086100.1 | Wheat | cytosol | 50.99 | 28.69 |
| GSMUA_Achr5P17110_001 | Banana | cytosol | 34.16 | 28.51 |
| TraesCS4A01G229900.1 | Wheat | cytosol | 49.51 | 28.49 |
| Os11t0255500-01 | Rice | cytosol | 50.49 | 28.41 |
| TraesCS5A01G303300.1 | Wheat | cytosol | 38.61 | 27.37 |
| TraesCS5B01G303700.1 | Wheat | golgi | 54.95 | 27.21 |
| Zm00001d049031_P001 | Maize | peroxisome | 33.66 | 27.2 |
| KXG23283 | Sorghum | cytosol | 35.64 | 25.62 |
| Solyc07g045080.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 34.16 | 22.92 |
| Solyc07g045090.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 32.18 | 18.9 |
| Solyc01g108150.2.1 | Tomato | nucleus | 23.76 | 7.57 |
| KRH49605 | Soybean | cytosol | 0.99 | 1.71 |
| Solyc12g010960.1.1 | Tomato | cytosol | 0.99 | 1.32 |
| Solyc06g064670.1.1 | Tomato | cytosol | 0.5 | 1.3 |
Protein Annotations
| EnsemblPlants:Solyc12g010970.1.1 | EnsemblPlantsGene:Solyc12g010970.1 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | InterPro:GroES-like_sf | PANTHER:PTHR43205 |
| PANTHER:PTHR43205:SF9 | PFAM:PF16884 | SEG:seg | SUPFAM:SSF50129 | UniParc:UPI0002769FFC | UniProt:K4DCI3 |
| MapMan:50.1.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:3833703..3835990
Molecular Weight (calculated)
22380.8 Da
IEP (calculated)
6.765
GRAVY (calculated)
-0.228
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEMIMNNK QIILKHYVEG YPKESDMEFK NNNIKLNVPE GSNVVVLKNL YLSCDPYMRN RMSKLEGSYI QSFTPGYPIT GYGVSKVVES SDSNYQKGDI
101: IWGMSGWEEY SVVTTTETTL FKIDHDKDVP LSYYTGILGM PGITAYVGFY EVCCPKKGES VFVSSASGAV GQLVGQFAKM LGCYVVGSAG NKQKVSTKTF
201: HS
101: IWGMSGWEEY SVVTTTETTL FKIDHDKDVP LSYYTGILGM PGITAYVGFY EVCCPKKGES VFVSSASGAV GQLVGQFAKM LGCYVVGSAG NKQKVSTKTF
201: HS
001: MTATNKQVVL KNYVSGFPKE SDFDFKTTTV EFKLPGGSNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYAPGKPIFG YGVSRVIESG HPDYKKGDLL
101: WGIVGWEEYS VITPMTHMHF KIQHTDIPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQFAKMMG CYVVGSAGST EKVDLLKTKF
201: GFDDAFNYKE EPDLSAALKR FSELLISKRL MSLTVRIGLH KKAAIHN
101: WGIVGWEEYS VITPMTHMHF KIQHTDIPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQFAKMMG CYVVGSAGST EKVDLLKTKF
201: GFDDAFNYKE EPDLSAALKR FSELLISKRL MSLTVRIGLH KKAAIHN
Arabidopsis Description
AT5g16970/F2K13_120 [Source:UniProtKB/TrEMBL;Acc:Q93Z72]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.