Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012166 | Potato | cytosol | 58.44 | 33.83 |
| Solyc12g010960.1.1 | Tomato | cytosol | 49.35 | 25.17 |
| Solyc01g080030.1.1 | Tomato | cytosol | 50.65 | 14.61 |
| Solyc11g030720.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 57.14 | 12.79 |
| Solyc03g007200.1.1 | Tomato | cytosol | 51.95 | 12.78 |
| Solyc06g063040.1.1 | Tomato | extracellular, plastid | 53.25 | 11.95 |
| Solyc12g010950.1.1 | Tomato | cytosol | 49.35 | 10.98 |
| Solyc12g096760.1.1 | Tomato | extracellular | 48.05 | 10.79 |
| Solyc05g055700.2.1 | Tomato | cytosol | 38.96 | 8.4 |
| Solyc07g045080.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 24.68 | 6.31 |
| Solyc07g045090.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 27.27 | 6.1 |
| Solyc01g108150.2.1 | Tomato | nucleus | 25.97 | 3.15 |
| Solyc09g091700.2.1 | Tomato | cytosol, nucleus, peroxisome | 11.69 | 2.88 |
| Solyc12g010970.1.1 | Tomato | cytosol | 1.3 | 0.5 |
| PGSC0003DMT400095859 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc06g064670.1.1 | EnsemblPlantsGene:Solyc06g064670.1 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43205 | PANTHER:PTHR43205:SF9 |
| SUPFAM:SSF51735 | UniParc:UPI0002766F03 | UniProt:K4C797 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6:-:40306584..40306817
Molecular Weight (calculated)
9268.5 Da
IEP (calculated)
8.471
GRAVY (calculated)
-0.030
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MLDEVILHMK CHGRIVVCGM ISQYGLKEQY GIHNLISKCI RIEGFSDVNY WKYYPQYLEW VISLIRDKKN CIFTRYC
001: MTTNKQVIFK DHVSGFPKES DFNFTTTTVE LRVPEGSKSV LVKNLYLSCD PYMRSRMGKP DPSSALAQAY APGKPIYGYG VSRVIESGHP DYKKGDLLWG
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE
Arabidopsis Description
P2NADP-dependent alkenal double bond reductase P2 [Source:UniProtKB/Swiss-Prot;Acc:Q39173]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.