Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071464 | Potato | cytosol | 24.19 | 54.22 |
| PGSC0003DMT400088882 | Potato | cytosol, nucleus, peroxisome | 80.65 | 42.98 |
| PGSC0003DMT400020183 | Potato | cytosol | 25.81 | 28.07 |
| PGSC0003DMT400083197 | Potato | cytosol | 33.33 | 25.41 |
| PGSC0003DMT400012544 | Potato | cytosol | 45.16 | 24.49 |
| PGSC0003DMT400075488 | Potato | cytosol | 44.62 | 24.2 |
| PGSC0003DMT400060048 | Potato | cytosol | 44.62 | 23.25 |
| PGSC0003DMT400020187 | Potato | cytosol | 42.47 | 23.17 |
| PGSC0003DMT400079649 | Potato | cytosol | 42.47 | 23.03 |
| PGSC0003DMT400028517 | Potato | cytosol | 7.53 | 8.48 |
| PGSC0003DMT400066606 | Potato | cytosol, endoplasmic reticulum, vacuole | 24.19 | 7.1 |
| PGSC0003DMT400012166 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400088089 | Potato | cytosol | 0.0 | 0.0 |
| Solyc06g064670.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400095859 | EnsemblPlantsGene:PGSC0003DMG400045430 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR43205 | PANTHER:PTHR43205:SF12 | PGSC:PGSC0003DMG400045430 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI000295447A |
| UniProt:M1DX71 | MapMan:50.1.3 | : | : | : | : |
Description
Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400045430]
Coordinates
chr9:-:22515747..22516307
Molecular Weight (calculated)
20585.7 Da
IEP (calculated)
8.569
GRAVY (calculated)
-0.159
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPKPGYHVS IDPYQINRMK IQSSSQGAIS FATAITLGES IDSYGVGSVL FSHRPEFKKG DFVARLLTCG EYSIIKEGSL LNKMDPNMGF PLSYHVRVFE
101: FRGPTAYGEF VEVCKSKLGE KVFVSAASDS IGHLAGQYAK LHGCYVVGYA GSQEKVNFLK EILGYDDAFN YKQQIDLKSA LKRCFP
101: FRGPTAYGEF VEVCKSKLGE KVFVSAASDS IGHLAGQYAK LHGCYVVGYA GSQEKVNFLK EILGYDDAFN YKQQIDLKSA LKRCFP
001: MTATNKQVIL KDYVSGFPTE SDFDFTTTTV ELRVPEGTNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYTPGQPIQG YGVSRIIESG HPDYKKGDLL
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE
Arabidopsis Description
AERNADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.