Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
  • cytoskeleton 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400088089 Potato cytosol 36.07 80.73
Solyc01g080030.1.1 Tomato cytosol 75.41 68.91
PGSC0003DMT400071464 Potato cytosol 22.95 67.47
PGSC0003DMT400012544 Potato cytosol 88.11 62.68
PGSC0003DMT400079649 Potato cytosol 86.07 61.22
PGSC0003DMT400020187 Potato cytosol 84.02 60.12
PGSC0003DMT400075488 Potato cytosol 78.28 55.69
VIT_05s0094g01120.t01 Wine grape cytosol 77.05 54.49
PGSC0003DMT400012166 Potato cytosol 24.59 45.11
PGSC0003DMT400060048 Potato cytosol 62.7 42.86
PGSC0003DMT400088882 Potato cytosol, nucleus, peroxisome 51.64 36.1
PGSC0003DMT400020183 Potato cytosol 25.0 35.67
PGSC0003DMT400095859 Potato cytosol 25.41 33.33
KRH49605 Soybean cytosol 13.52 28.21
PGSC0003DMT400028517 Potato cytosol 10.66 15.76
PGSC0003DMT400066606 Potato cytosol, endoplasmic reticulum, vacuole 35.25 13.56
Protein Annotations
EnsemblPlants:PGSC0003DMT400083197EnsemblPlantsGene:PGSC0003DMG400033113Gene3D:3.40.50.720Gene3D:3.90.180.10GO:GO:0008150GO:GO:0008152
GO:GO:0055114InterPro:ADH_CInterPro:GroES-like_sfInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR43205PANTHER:PTHR43205:SF9
PFAM:PF00107PGSC:PGSC0003DMG400033113SUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI000294A3B2UniProt:M1D6P3
MapMan:50.1.3:::::
Description
Allyl alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400033113]
Coordinates
chr1:+:61698511..61700781
Molecular Weight (calculated)
27169.9 Da
IEP (calculated)
5.118
GRAVY (calculated)
0.064
Length
244 amino acids
Sequence
(BLAST)
001: MTGWEEYSIV TPTDQNYLFK INDKDVPLSY YTGILGMPGM TAYVGFYEIC SPKKGETVFV SAASGAVGQL VGQFAKMLGC YVVGSAGSKE KVDLLKSKFG
101: FDEAFNYKEE HDLDAALKRY FPDGIDIYFE NVGGKMLDAV LLNMKLHGRI AACGMISQYN LEQTEGVHNL FYLISKRIRM EGFIIFDYFH LYSKYLEMII
201: PKIKAGNVVY VEDVVEGLEN APTALVGLFS GHNIGKQVVM VSSE
Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)
001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE
Arabidopsis Description
Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.