Factsheet for PGSC0003DMT400020187

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020183	Potato	cytosol	44.57	88.89
PGSC0003DMT400088089	Potato	cytosol	28.15	88.07
PGSC0003DMT400083197	Potato	cytosol	60.12	84.02
PGSC0003DMT400012544	Potato	cytosol	80.65	80.17
PGSC0003DMT400079649	Potato	cytosol	78.01	77.55
PGSC0003DMT400075488	Potato	cytosol	71.26	70.85
VIT_05s0094g01120.t01	Wine grape	cytosol	69.79	68.99
PGSC0003DMT400071464	Potato	cytosol	15.84	65.06
PGSC0003DMT400060048	Potato	cytosol	58.94	56.3
PGSC0003DMT400088882	Potato	cytosol, nucleus, peroxisome	46.33	45.27
PGSC0003DMT400095859	Potato	cytosol	23.17	42.47
PGSC0003DMT400012166	Potato	cytosol	16.42	42.11
PGSC0003DMT400028517	Potato	cytosol	19.35	40.0
KRH49605	Soybean	cytosol	10.56	30.77
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	28.15	15.14

Protein Annotations

EnsemblPlants:PGSC0003DMT400020187	EnsemblPlantsGene:PGSC0003DMG400007803	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_C	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9
PFAM:PF00107	PFAM:PF16884	PGSC:PGSC0003DMG400007803	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000294AAC3
UniProt:M1AD20	MapMan:50.1.3	:	:	:	:

Description

Allyl alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400007803]

Coordinates

chr12:+:1470791..1472585

Molecular Weight (calculated)

38207.6 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.072

Length

341 amino acids

Sequence
(BLAST)

001: MMNNKQIILK HYVEGYPKES DMEFKNNNIK LNVQEGSNVV VLMNLYLSCD PYMRSRMKNL EDSYVESFTP GYPITGCGVA KVLKSGDSNF QEGDLVWGMI
101: GWEEYSIVTP TQSYLFKIHD KNVPLSYYTG ILGMPGITAY VGFYEVCSPK KGETVFVSAA SGAVGQLVGQ FAKMLGCYVI GSAGTKQKVD MLKSKFGFDE
201: AFNYKEEQDL DAALKRYFSD GIDIYFDNVG GKMFDAVLLN MKLHGRIAMC GMISQYNLKK TEGVHNLLCL IAKRICMKGF IVSDHFHLYP KYIEMIIPQI
301: KGGNMVYVED IAEGLENAPK ALVGLFYGRN VGKQVVMVSR E

Best Arabidopsis Sequence Match ( AT5G16990.1 )
(BLAST)

001: MTTNKQVIFK DHVSGFPKES DFNFTTTTVE LRVPEGSKSV LVKNLYLSCD PYMRSRMGKP DPSSALAQAY APGKPIYGYG VSRVIESGHP DYKKGDLLWG
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE

Arabidopsis Description

P2NADP-dependent alkenal double bond reductase P2 [Source:UniProtKB/Swiss-Prot;Acc:Q39173]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.