Factsheet for PGSC0003DMT400071464

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095859	Potato	cytosol	54.22	24.19
Solyc11g030720.1.1	Tomato	cytoskeleton, cytosol, peroxisome	98.8	23.84
PGSC0003DMT400083197	Potato	cytosol	67.47	22.95
GSMUA_Achr5P17090_001	Banana	cytosol	69.88	16.81
PGSC0003DMT400012544	Potato	cytosol	67.47	16.33
PGSC0003DMT400075488	Potato	cytosol	67.47	16.33
PGSC0003DMT400020187	Potato	cytosol	65.06	15.84
PGSC0003DMT400079649	Potato	cytosol	65.06	15.74
TraesCS3A01G087300.1	Wheat	cytosol	63.86	15.01
TraesCS3D01G087400.1	Wheat	cytosol	63.86	14.89
TraesCS3B01G102600.1	Wheat	cytosol	62.65	14.69
HORVU3Hr1G015680.3	Barley	cytosol, peroxisome	63.86	14.68
PGSC0003DMT400060048	Potato	cytosol	62.65	14.57
Zm00001d008377_P001	Maize	extracellular, mitochondrion	62.65	14.53
HORVU3Hr1G015640.7	Barley	cytosol, mitochondrion, peroxisome	65.06	14.48
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	62.65	14.44
PGSC0003DMT400088882	Potato	cytosol, nucleus, peroxisome	60.24	14.33
PGSC0003DMT400020183	Potato	cytosol	22.89	11.11
PGSC0003DMT400028517	Potato	cytosol	10.84	5.45
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	37.35	4.89
AT5G37960.1	Thale cress	cytosol	2.41	1.85
PGSC0003DMT400088089	Potato	cytosol	0.0	0.0
PGSC0003DMT400012166	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400071464	EnsemblPlantsGene:PGSC0003DMG400027805	EntrezGene:102584583	Gene3D:3.40.50.720	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_C	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	PFAM:PF00107
PGSC:PGSC0003DMG400027805	RefSeq:XP_006363663.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002966AC0	UniProt:M1CNU3
MapMan:50.1.3	:	:	:	:	:

Description

Quinone oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400027805]

Coordinates

chr11:+:24818524..24818834

Molecular Weight (calculated)

8649.3 Da

IEP (calculated)

8.200

GRAVY (calculated)

0.023

Length

83 amino acids

Sequence
(BLAST)

1: MPGLAAYIGF NNLCSAKEGD VVYVSSAAGG VGQLVGQFAK MKGCYVVGSA STDEKVHLLK SQLGFDDAFN YKQGNDLAGA LKR

Best Arabidopsis Sequence Match ( AT5G17000.2 )
(BLAST)

001: MTATNKQVVL KNYVSGFPKE SDFDFKTTTV EFKLPGGSNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYAPGKPIFG YGVSRVIESG HPDYKKGDLL
101: WGIVGWEEYS VITPMTHMHF KIQHTDIPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQFAKMMG CYVVGSAGST EKVDLLKTKF
201: GFDDAFNYKE EPDLSAALKR FSELLISKRL MSLTVRIGLH KKAAIHN

Arabidopsis Description

AT5g16970/F2K13_120 [Source:UniProtKB/TrEMBL;Acc:Q93Z72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.