Factsheet for TraesCS3A01G087300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G087400.1	Wheat	cytosol	97.45	96.63
HORVU3Hr1G015640.7	Barley	cytosol, mitochondrion, peroxisome	91.22	86.33
Zm00001d008377_P001	Maize	extracellular, mitochondrion	74.79	73.74
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	74.5	73.06
GSMUA_Achr5P17090_001	Banana	cytosol	66.86	68.41
PGSC0003DMT400071464	Potato	cytosol	15.01	63.86
TraesCS5A01G303300.1	Wheat	cytosol	46.74	57.89
TraesCS5A01G303400.1	Wheat	cytosol	55.24	56.36
TraesCS3A01G401400.1	Wheat	cytosol	55.52	55.68
TraesCS2A01G070000.1	Wheat	cytosol	53.54	54.62
TraesCS2A01G069900.1	Wheat	peroxisome	51.56	52.91
TraesCS5A01G091700.1	Wheat	cytosol	50.99	52.17
Solyc11g030720.1.1	Tomato	cytoskeleton, cytosol, peroxisome	50.71	52.03
TraesCS4A01G229900.1	Wheat	cytosol	49.01	49.29
TraesCS7A01G374800.1	Wheat	cytosol	45.89	47.37
AT5G37960.1	Thale cress	cytosol	10.48	34.26
TraesCS5A01G240300.1	Wheat	nucleus	27.2	15.14
TraesCS5A01G240400.1	Wheat	peroxisome	26.63	14.83

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF18	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS3A01G087300	EnsemblPlants:TraesCS3A01G087300.1	:	:

Description

No Description!

Coordinates

chr3A:-:56390313..56391374

Molecular Weight (calculated)

38351.4 Da

IEP (calculated)

6.909

GRAVY (calculated)

-0.024

Length

353 amino acids

Sequence
(BLAST)

001: MAELKSRRVI LKDYVEGYPT EAHMELLPAA PVDEAEEGSV LVKNLYLSCD PYMRPKMSRP LHQSYTAAFV PGAAITGYGV SQVVRSSRPG LAAGDLVWGM
101: TGWEDYSVIK PPFTAILTKI QPDDGVPLSY YTGILGMPGL TAYVGFHHIC SPKAGETVFV SAASGAVGQL VGQFARLLGC HVVGSAGSKE KVDLLINKFG
201: FHDAFNYKEE DADLAGALKK RFPDGIDVYF ENVGGKMLEA VLLNMKVHGR IAVCGLISQY NLTAGEKDAD VGVRNLTSLV SKRIKMQGFI EPDHKHLYPE
301: YMAWVLPHIK EGRVVYVEDV ADGLDAAPAA LIGLYHGRNV GKQVVRLTNP DPK

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.