CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

plastid 2
peroxisome 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008377_P001	Maize	extracellular, mitochondrion	93.06	93.58
TraesCS3A01G087300.1	Wheat	cytosol	73.06	74.5
TraesCS3D01G087400.1	Wheat	cytosol	73.61	74.44
TraesCS3B01G102600.1	Wheat	cytosol	69.44	70.62
GSMUA_Achr5P17090_001	Banana	cytosol	67.5	70.43
HORVU3Hr1G015680.3	Barley	cytosol, peroxisome	69.44	69.25
HORVU3Hr1G015640.7	Barley	cytosol, mitochondrion, peroxisome	70.56	68.1
PGSC0003DMT400071464	Potato	cytosol	14.44	62.65
KXG23283	Sorghum	cytosol	45.0	57.65
OQU83135	Sorghum	cytosol	54.44	55.68
EES16901	Sorghum	cytosol	54.44	55.52
KXG28081	Sorghum	peroxisome	54.17	54.93
EES08221	Sorghum	cytosol	53.33	54.55
Solyc11g030720.1.1	Tomato	cytoskeleton, cytosol, peroxisome	50.83	53.2
EER90008	Sorghum	cytosol	44.17	45.95
AT5G37960.1	Thale cress	cytosol	13.06	43.52
EES01886	Sorghum	extracellular	57.5	31.41
OQU87352	Sorghum	cytosol	9.17	18.75
EER96863	Sorghum	peroxisome	28.89	16.4
OQU89618	Sorghum	peroxisome	27.22	15.29

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EntrezGene:8072388	InterPro:ADH_C	UniProt:C5XFP2
EnsemblPlants:EES02675	ProteinID:EES02675	ProteinID:EES02675.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF18	SMART:SM00829	EnsemblPlantsGene:SORBI_3003G110200
SUPFAM:SSF50129	SUPFAM:SSF51735	unigene:Sbi.5323	UniParc:UPI0001A84DB2	RefSeq:XP_002457555.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:9939317..9940773

Molecular Weight (calculated)

39156.0 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.054

Length

360 amino acids

Sequence
(BLAST)

001: MATTTATATN RRVILKEYVE GYPREEHMEL LPGSSVPLRL TGTEPAGSVL VRNLYLSCDP YMRPKMSRPL RESYTAAFVP GDAITGYGVS RVLDSSDPRF
101: APGDLVWGIT GWEDYSVVTP PVSKFLAKIS HHGEGVPLSY YTGILGMPGL TAYVGFHEIC APKKGETVFV SAASGAVGQL VGQFARLAGC HVVGSAGSKE
201: KVELLKTKFG FHDAFNYKEE PDLGAALKRC FPDGIDIYFE NVGGAMLDAV LLNMRVHGRI AVCGFISQYN LADGEKDAVR NLAAVIAKRL RLQGFIEPDH
301: KHLYPQYEAW VLPYIRDGTL AYVEDVAEGL ENAPKALIGL FHGRNVGKQL VRVADDESAA

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.