Factsheet for GSMUA_Achr5P17090_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071464	Potato	cytosol	16.81	69.88
GSMUA_Achr5P17110_001	Banana	cytosol	48.99	69.83
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	70.43	67.5
Zm00001d008377_P001	Maize	extracellular, mitochondrion	69.86	67.32
TraesCS3D01G087400.1	Wheat	cytosol	69.28	67.13
TraesCS3A01G087300.1	Wheat	cytosol	68.41	66.86
GSMUA_Achr6P06920_001	Banana	cytosol	66.67	66.28
TraesCS3B01G102600.1	Wheat	cytosol	65.51	63.84
HORVU3Hr1G015640.7	Barley	cytosol, mitochondrion, peroxisome	67.25	62.2
HORVU3Hr1G015680.3	Barley	cytosol, peroxisome	64.64	61.77
GSMUA_Achr10P...	Banana	cytosol	59.71	59.37
Solyc11g030720.1.1	Tomato	cytoskeleton, cytosol, peroxisome	58.84	59.01
GSMUA_Achr7P10120_001	Banana	cytosol	49.86	49.28
GSMUA_Achr5P17100_001	Banana	cytosol	13.62	43.93
AT5G37960.1	Thale cress	cytosol	12.17	38.89
GSMUA_Achr8P08570_001	Banana	extracellular	60.0	35.69
GSMUA_Achr7P10110_001	Banana	cytosol	50.43	25.4
GSMUA_Achr6P04320_001	Banana	cytosol	31.3	17.06

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G17090_001	EnsemblPlants:GSMUA_Achr5P17090_001
EnsemblPlants:GSMUA_Achr5T17090_001	InterPro:GroES-like_sf	UniProt:M0SZ88	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884
InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI000295D449	:	:	:	:	:

Description

Probable NADP-dependent oxidoreductase P2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G17090_001]

Coordinates

chr5:+:15950250..15960691

Molecular Weight (calculated)

37800.8 Da

IEP (calculated)

6.777

GRAVY (calculated)

0.005

Length

345 amino acids

Sequence
(BLAST)

001: MAAAELSNKR VIFKDYVTGY PKEEDMILTS ATVPSKVPQG STAVLLKNLY LSCDPYMRGR MSKPINHSYT DAFTPGSVII GYGVSKVVDS GHPDFSPGDL
101: VWGMTGWEEY TLVTTPKGLT KIKYTDVPLS YYTGILGMPG LTAYVGFHEI CSPKKGETVY VSAASGAVGQ LVGQFAKLMG CYVVGSAGTK EKVDLLKAKF
201: GFDDAFNYKE EEDLDAALKR CFPDGIDIYF ENVGGKMLDA VLLNMRVHGR IAVCGLISQY NLTQREGIYN MTAIVTKRIK MQGFIEPDHK HLYPQFLEAV
301: IQFIRDGKVV YVEDIAEGIE KAPSALIGLF TGCNVGKQVV LVARD

Best Arabidopsis Sequence Match ( AT5G16990.1 )
(BLAST)

001: MTTNKQVIFK DHVSGFPKES DFNFTTTTVE LRVPEGSKSV LVKNLYLSCD PYMRSRMGKP DPSSALAQAY APGKPIYGYG VSRVIESGHP DYKKGDLLWG
101: IVGWEEYSVI TPMAHMHFKI QHTDVPLSYY TGLLGMPGMT AYAGFYEVCS PKKGETVYVS AASGAVGQLV GQFAKMMGCY VVGSAGSKEK VDLLKTKFGF
201: DDAFNYKEES DLSAALKRCF PKGIDMYFEN VGGKMLDAVL LNMNPHGRIA VCGMISQYNL ENQEGVHNLS NIIYKRIRIQ GFVVADFYDK YPKFLELVLP
301: RIKEGKITYV EDVADGLEKA PEALVGLFHG KNVGKQVVVI ARE

Arabidopsis Description

P2NADP-dependent alkenal double bond reductase P2 [Source:UniProtKB/Swiss-Prot;Acc:Q39173]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.