Factsheet for GSMUA_Achr6P04320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50260	Soybean	extracellular	24.17	73.56
VIT_03s0063g00610.t01	Wine grape	peroxisome	73.3	73.19
TraesCS5A01G240300.1	Wheat	nucleus	72.35	72.24
TraesCS5B01G238400.1	Wheat	peroxisome	72.35	72.24
TraesCS5D01G246800.2	Wheat	peroxisome	72.04	71.92
EER96863	Sorghum	peroxisome	71.72	71.61
Os09t0459800-01	Rice	nucleus, plasma membrane	71.09	70.98
KRH71155	Soybean	nucleus	70.93	70.93
Zm00001d020727_P016	Maize	mitochondrion	70.77	70.66
Solyc01g108150.2.1	Tomato	nucleus	69.35	69.24
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	69.04	68.93
TraesCS5A01G240400.1	Wheat	peroxisome	68.56	68.45
TraesCS5B01G238500.1	Wheat	peroxisome	68.25	68.14
TraesCS5D01G247000.2	Wheat	peroxisome	63.51	68.02
OQU89618	Sorghum	peroxisome	68.88	68.02
CDY16520	Canola	cytosol, peroxisome, plastid	67.14	67.57
CDY32846	Canola	cytosol, peroxisome, plastid	66.98	67.41
CDY51039	Canola	cytosol, peroxisome, plastid	66.98	67.3
CDY28090	Canola	cytosol, peroxisome, plastid	66.98	67.3
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	66.82	67.25
HORVU5Hr1G068630.9	Barley	plastid	69.19	67.08
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	67.3	65.54
KRG88432	Soybean	cytosol	26.22	65.35
AT1G49670.2	Thale cress	peroxisome	66.67	64.72
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	65.72	63.61
OQU87352	Sorghum	cytosol	12.01	43.18
GSMUA_Achr5P17110_001	Banana	cytosol	12.64	33.06
GSMUA_Achr5P17090_001	Banana	cytosol	17.06	31.3
GSMUA_Achr6P06920_001	Banana	cytosol	16.11	29.39
GSMUA_Achr10P...	Banana	cytosol	16.11	29.39
GSMUA_Achr7P10120_001	Banana	cytosol	14.53	26.36
GSMUA_Achr5P17100_001	Banana	cytosol	3.32	19.63
GSMUA_Achr8P08570_001	Banana	extracellular	15.96	17.41
GSMUA_Achr7P10110_001	Banana	cytosol	14.69	13.58

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005777	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G04320_001	EnsemblPlants:GSMUA_Achr6P04320_001	EnsemblPlants:GSMUA_Achr6T04320_001
InterPro:GroES-like_sf	UniProt:M0T430	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS01162	PANTHER:PTHR43677	PANTHER:PTHR43677:SF3
InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000296EA9C

Description

Putative Zinc-binding alcohol dehydrogenase domain-containing protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G04320_001]

Coordinates

chr6:+:2929565..2959474

Molecular Weight (calculated)

68791.2 Da

IEP (calculated)

9.172

GRAVY (calculated)

0.129

Length

633 amino acids

Sequence
(BLAST)

001: MELKPGMSAI VTGGASGIGK ALSMALAQKG IFVTVIDFSE EKGKEVVLLI ERENTKFHPE LKFPSAIFVK CDVTDTNGLA AAFEKHLEVF GGLDICINSA
101: GITHHILFHE DKTNGIDTWK RTINVNLTAV VDCTRIAIQI MRYKKKPGVI INLGSASGLY PLYADPIYSG TKGGVVLFTR ALVPLKREGI RVNVLCPEFV
201: QTEMGSKINP KIVDAVGGFL SMDTVVNGAI ELIKDESKAG ACLWITRRRG MEYWPTPSEE RKYLIRPYKS RRRIQYTTTS DILIPDTFEK VIVHSLDHNF
301: RFATKVVQTE LKLPIKPHHA LVKIIYAGVN ASDVNFSSGR YFKGKVNEIA ARLPFDAGFE AVGIIAAVGE SVHLKIGAPV AFMAFGSYAE FSVVPAKHLL
401: PVPRPDAEVL AMLTSGLTAS IALEKAGQME SGQVVLVTAA AGGTGQFAVQ LAKLAGNKVV ATCGGETKAS LLRSLGADRV IDYKKENIKD VLKKEFPKGI
501: DIVYESVGGE MFNLCLNALA VHGRLIVIGM ISQYQGKHGW EPLKYTGLCE KILSKSQTVA GFFLIQHASL WQEHLDRLFD LYSAGKLKVA VDPKGFMGVG
601: SVADAVEYLH SGESLGKVVV CIDPTFCKKT AKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.