Factsheet for VIT_03s0063g00610.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g108150.2.1	Tomato	nucleus	76.97	76.97
KRH50260	Soybean	extracellular	25.24	76.92
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	76.81	76.81
KRH71155	Soybean	nucleus	75.71	75.83
GSMUA_Achr6P04320_001	Banana	cytosol	73.19	73.3
CDY28090	Canola	cytosol, peroxisome, plastid	72.71	73.17
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	72.4	72.97
CDY51039	Canola	cytosol, peroxisome, plastid	72.4	72.86
CDY32846	Canola	cytosol, peroxisome, plastid	71.61	72.18
CDY16520	Canola	cytosol, peroxisome, plastid	71.29	71.86
EER96863	Sorghum	peroxisome	70.66	70.66
Os09t0459800-01	Rice	nucleus, plasma membrane	70.5	70.5
TraesCS5A01G240300.1	Wheat	nucleus	70.35	70.35
TraesCS5D01G246800.2	Wheat	peroxisome	70.19	70.19
TraesCS5B01G238400.1	Wheat	peroxisome	70.19	70.19
Zm00001d020727_P016	Maize	mitochondrion	70.19	70.19
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	71.14	69.38
AT1G49670.2	Thale cress	peroxisome	71.29	69.33
KRG88432	Soybean	cytosol	27.44	68.5
TraesCS5A01G240400.1	Wheat	peroxisome	67.03	67.03
OQU89618	Sorghum	peroxisome	67.35	66.61
TraesCS5B01G238500.1	Wheat	peroxisome	66.09	66.09
TraesCS5D01G247000.2	Wheat	peroxisome	61.36	65.82
HORVU5Hr1G068630.9	Barley	plastid	66.56	64.62
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	65.14	63.15
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	11.36	54.55
OQU87352	Sorghum	cytosol	11.99	43.18
VIT_05s0094g01160.t01	Wine grape	cytosol	17.03	31.3
VIT_05s0094g01120.t01	Wine grape	cytosol	16.56	30.43
VIT_05s0094g01130.t01	Wine grape	cytosol	16.4	30.41
VIT_05s0094g01250.t01	Wine grape	cytosol	13.25	30.11
VIT_05s0094g01140.t01	Wine grape	cytosol	16.09	29.82
VIT_05s0094g01260.t01	Wine grape	cytosol	16.09	29.82
VIT_05s0094g01150.t01	Wine grape	cytosol	16.09	29.65
VIT_00s0220g00130.t01	Wine grape	cytosol	15.62	28.61
VIT_05s0094g01230.t01	Wine grape	cytosol	11.83	27.17
VIT_11s0052g00410.t01	Wine grape	cytosol	14.83	27.09
VIT_11s0052g00420.t01	Wine grape	cytosol	14.35	26.69
VIT_11s0016g05230.t01	Wine grape	cytosol	14.2	26.01
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	13.56	23.82
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	13.09	22.99

Protein Annotations

EntrezGene:100258817	wikigene:100258817	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C
InterPro:ADH_N	ProteinID:CBI32427	ProteinID:CBI32427.3	UniProt:D7TPK4	EMBL:FN596006	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005777	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100258817	wikigene:LOC100258817
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162	PANTHER:PTHR43677	PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS
InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TIGR:TC59039
TIGR:TC63401	TIGR:TC64199	UniParc:UPI00015C8CE3	ArrayExpress:VIT_03s0063g00610	EnsemblPlantsGene:VIT_03s0063g00610	EnsemblPlants:VIT_03s0063g00610.t01
unigene:Vvi.9037	RefSeq:XP_002285205	RefSeq:XP_002285205.1	:	:	:

Description

No Description!

Coordinates

chr3:+:4130658..4162029

Molecular Weight (calculated)

68704.0 Da

IEP (calculated)

9.631

GRAVY (calculated)

0.119

Length

634 amino acids

Sequence
(BLAST)

001: MELKPGLSAL VTGGASGIGK AISLALGEKG IFVTVVDFSE ERGKEVASLV EKENAKFHPK LGFPSAMFIR CDVTNTRELA AAFKKHLATY GGLDICVNSA
101: GIGTHEPFHK DQTENSGLWR RTINVNLVAV IDCTRLAIQT MQAAKKPGVI INMGSASGLY PMYVDPIYSA SKGGVVLFTR SLAPYKRHGI RVNVLCPEFV
201: QTEMGSSVDS KFIGLMGGYV SMEMVVKGAF ELISDERKAG SCLWITNRRG MEYWPTPIEE AKYRLPISKS RRKVPFKASL NLQIPQSFEK VVVHTLSHNF
301: RSATSIVRVP LRLPIKPRHV LVKIIYAGVN ASDVNFSSGR YFGGNDKDLG SRLPFDAGFE AVGIIAAVGD SVNDLKIGTP AAVMIFGSYA EFMMVPSKHI
401: LPVARPDPEV VAMLTSGLTA SIALEKAVQM ESGKVVLVTA AAGGTGQFAV QLAKLAGNTV IATCGGKEKA MLLRDLGVDR VIDYKAEDIK TVLKKEFPKG
501: VDIIYESVGG EMFNLCLNAL ATYGRLVVIG MISQYQGARG WQPSNYTGLC EKLLAKSQTV AGFFLVQYAH LWQEHLDRLF HLFSLGKLKV AVDPKRFLGL
601: HAVADAVEYL HSGKSAGKVI VCIDPAYSQQ TAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.